Detailed information NTG1095209

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: ACMVYK_RS11525
• Genome accession: NZ_CP180313
• Coordinates: 2420487..2420996 (+)
• Length: 169 a.a.
• NCBI ID: WP_001831333.1
• Uniprot ID: A0A2G7I1N0
• Organism: Staphylococcus epidermidis strain YSMAS1_1_E3
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2415487..2425996

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMVYK_RS11490 (ACMVYK_11490)	-	2415604..2415807 (+)	204	WP_001831361.1	DUF951 domain-containing protein	-
ACMVYK_RS11495 (ACMVYK_11495)	ychF	2415819..2416916 (+)	1098	WP_001831336.1	redox-regulated ATPase YchF	-
ACMVYK_RS11500 (ACMVYK_11500)	-	2417149..2417340 (-)	192	WP_001831355.1	hypothetical protein	-
ACMVYK_RS11505 (ACMVYK_11505)	-	2417414..2417995 (-)	582	Protein_2230	GH25 family lysozyme	-
ACMVYK_RS11510 (ACMVYK_11510)	-	2418102..2419301 (-)	1200	WP_071813246.1	IS110-like element ISSep2 family transposase	-
ACMVYK_RS11515 (ACMVYK_11515)	-	2419553..2419783 (-)	231	Protein_2232	lysozyme	-
ACMVYK_RS11520 (ACMVYK_11520)	rpsF	2420168..2420464 (+)	297	WP_001831345.1	30S ribosomal protein S6	-
ACMVYK_RS11525 (ACMVYK_11525)	ssbA	2420487..2420996 (+)	510	WP_001831333.1	single-stranded DNA-binding protein	Machinery gene
ACMVYK_RS11530 (ACMVYK_11530)	rpsR	2421041..2421283 (+)	243	WP_001831354.1	30S ribosomal protein S18	-
ACMVYK_RS11535 (ACMVYK_11535)	-	2421467..2421639 (-)	173	Protein_2236	XRE family transcriptional regulator	-
ACMVYK_RS11540 (ACMVYK_11540)	-	2421753..2422013 (-)	261	WP_001830921.1	hypothetical protein	-
ACMVYK_RS11545 (ACMVYK_11545)	-	2422235..2422489 (+)	255	WP_001832461.1	GlsB/YeaQ/YmgE family stress response membrane protein	-
ACMVYK_RS11550 (ACMVYK_11550)	-	2422709..2422798 (-)	90	Protein_2239	hypothetical protein	-
ACMVYK_RS11555 (ACMVYK_11555)	-	2422961..2423593 (+)	633	WP_001830914.1	LysE family translocator	-
ACMVYK_RS11560 (ACMVYK_11560)	-	2423614..2424204 (+)	591	WP_415404940.1	histidine phosphatase family protein	-
ACMVYK_RS11565 (ACMVYK_11565)	-	2424620..2424997 (-)	378	WP_002437185.1	hypothetical protein	-
ACMVYK_RS11570 (ACMVYK_11570)	-	2425217..2425840 (-)	624	WP_002456828.1	NDxxF motif lipoprotein	-

Sequence

Protein

• Length: 169 a.a.
• Molecular weight: 18680.20 Da
• Isoelectric Point: 4.9056

>NTDB_id=1095209 ACMVYK_RS11525 WP_001831333.1 2420487..2420996(+) (ssbA) [Staphylococcus epidermidis strain YSMAS1_1_E3]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQAENVNNYLSKGSLAGVDGRIQSR
SYENQEGRRIFVTEVVCDSVQFLEPKNAQHGGQRSQNNNFQDYGQGFGGQQSGQNTSYNNNNSSNSNQSDNPFANANGPI
DISDDDLPF

Nucleotide

• Length: 510 bp

>NTDB_id=1095209 ACMVYK_RS11525 WP_001831333.1 2420487..2420996(+) (ssbA) [Staphylococcus epidermidis strain YSMAS1_1_E3]
ATGTTAAATCGAGTTGTATTAGTAGGTCGTCTAACGAAAGATCCAGAATACAGAACCACACCCTCAGGCGTAAGTGTAGC
GACATTTACTCTAGCAGTTAATCGTACTTTCACGAATGCTCAAGGGGAACGCGAAGCTGACTTTATTAACTGTGTAGTCT
TCCGTAGACAAGCAGAAAATGTAAATAACTACTTGTCTAAAGGTAGTTTAGCTGGCGTTGATGGTCGCATACAATCACGT
AGTTATGAAAATCAAGAAGGTCGTCGTATTTTTGTTACTGAAGTCGTATGTGATAGTGTTCAGTTCCTTGAACCTAAAAA
TGCACAACATGGTGGCCAACGTTCACAGAACAATAATTTCCAAGACTACGGTCAAGGATTTGGTGGTCAGCAATCAGGAC
AAAATACATCTTACAACAACAATAATTCATCAAACTCAAATCAGTCGGATAATCCGTTTGCAAATGCTAATGGACCGATT
GATATCAGTGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A2G7I1N0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	64.607	100	0.68
ssb	Latilactobacillus sakei subsp. sakei 23K	55.172	100	0.568
ssbB	Bacillus subtilis subsp. subtilis str. 168	60.377	62.722	0.379