Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HW05_RS15090 Genome accession   NZ_CP008861
Coordinates   3278708..3279115 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain H47921     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3273708..3284115
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HW05_RS15070 (HW05_15195) pilK 3274640..3275515 (-) 876 WP_003100938.1 type 4 fimbrial methyltransferase PilK -
  HW05_RS15075 (HW05_15200) pilJ 3275576..3277624 (-) 2049 WP_003100940.1 chemotaxis chemoreceptor PilJ -
  HW05_RS15080 (HW05_15205) - 3277709..3278245 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  HW05_RS15085 (HW05_15210) pilH 3278296..3278661 (-) 366 WP_003084587.1 twitching motility response regulator PilH Machinery gene
  HW05_RS15090 (HW05_15215) pilG 3278708..3279115 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  HW05_RS15095 (HW05_15220) gshB 3279370..3280323 (+) 954 WP_003100943.1 glutathione synthase -
  HW05_RS15100 (HW05_15225) - 3280470..3281363 (+) 894 WP_003162015.1 energy transducer TonB -
  HW05_RS15105 (HW05_15230) - 3281412..3281981 (+) 570 WP_010793542.1 YqgE/AlgH family protein -
  HW05_RS15110 (HW05_15235) ruvX 3281981..3282415 (+) 435 WP_003121753.1 Holliday junction resolvase RuvX -
  HW05_RS15115 (HW05_15240) pyrR 3282527..3283039 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HW05_RS15120 (HW05_15245) - 3283063..3284067 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=109519 HW05_RS15090 WP_003084583.1 3278708..3279115(-) (pilG) [Pseudomonas aeruginosa strain H47921]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=109519 HW05_RS15090 WP_003084583.1 3278708..3279115(-) (pilG) [Pseudomonas aeruginosa strain H47921]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385