Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | HW05_RS15085 | Genome accession | NZ_CP008861 |
| Coordinates | 3278296..3278661 (-) | Length | 121 a.a. |
| NCBI ID | WP_003084587.1 | Uniprot ID | A0A0H2ZKW2 |
| Organism | Pseudomonas aeruginosa strain H47921 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3273296..3283661
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HW05_RS15070 (HW05_15195) | pilK | 3274640..3275515 (-) | 876 | WP_003100938.1 | type 4 fimbrial methyltransferase PilK | - |
| HW05_RS15075 (HW05_15200) | pilJ | 3275576..3277624 (-) | 2049 | WP_003100940.1 | chemotaxis chemoreceptor PilJ | - |
| HW05_RS15080 (HW05_15205) | - | 3277709..3278245 (-) | 537 | WP_003084590.1 | chemotaxis protein CheW | - |
| HW05_RS15085 (HW05_15210) | pilH | 3278296..3278661 (-) | 366 | WP_003084587.1 | twitching motility response regulator PilH | Machinery gene |
| HW05_RS15090 (HW05_15215) | pilG | 3278708..3279115 (-) | 408 | WP_003084583.1 | twitching motility response regulator PilG | Regulator |
| HW05_RS15095 (HW05_15220) | gshB | 3279370..3280323 (+) | 954 | WP_003100943.1 | glutathione synthase | - |
| HW05_RS15100 (HW05_15225) | - | 3280470..3281363 (+) | 894 | WP_003162015.1 | energy transducer TonB | - |
| HW05_RS15105 (HW05_15230) | - | 3281412..3281981 (+) | 570 | WP_010793542.1 | YqgE/AlgH family protein | - |
| HW05_RS15110 (HW05_15235) | ruvX | 3281981..3282415 (+) | 435 | WP_003121753.1 | Holliday junction resolvase RuvX | - |
| HW05_RS15115 (HW05_15240) | pyrR | 3282527..3283039 (+) | 513 | WP_003084574.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13273.30 Da Isoelectric Point: 5.1961
>NTDB_id=109518 HW05_RS15085 WP_003084587.1 3278296..3278661(-) (pilH) [Pseudomonas aeruginosa strain H47921]
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVII
VTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
Nucleotide
Download Length: 366 bp
>NTDB_id=109518 HW05_RS15085 WP_003084587.1 3278296..3278661(-) (pilH) [Pseudomonas aeruginosa strain H47921]
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
ATGGCTCGTATTTTGATTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCA
GGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGCCCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCG
TCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAGACCAGCGCCATCCCGGTGATCATC
GTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGGTGGA
CGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
36.975 |
98.347 |
0.364 |