Detailed information NTG1094275

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: ACMUKF_RS11560
• Genome accession: NZ_CP180176
• Coordinates: 2413852..2414361 (-)
• Length: 169 a.a.
• NCBI ID: WP_001831333.1
• Uniprot ID: A0A2G7I1N0
• Organism: Staphylococcus epidermidis strain 1457_SeCI_SE48
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2408852..2419361

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMUKF_RS11515 (ACMUKF_11515)	-	2409064..2409687 (+)	624	WP_002437175.1	NDxxF motif lipoprotein	-
ACMUKF_RS11520 (ACMUKF_11520)	-	2409907..2410284 (+)	378	WP_002485221.1	hypothetical protein	-
ACMUKF_RS11525 (ACMUKF_11525)	-	2410644..2411234 (-)	591	WP_002485681.1	histidine phosphatase family protein	-
ACMUKF_RS11530 (ACMUKF_11530)	-	2411255..2411887 (-)	633	WP_001830914.1	LysE family translocator	-
ACMUKF_RS11535 (ACMUKF_11535)	-	2412050..2412139 (+)	90	Protein_2222	hypothetical protein	-
ACMUKF_RS11540 (ACMUKF_11540)	-	2412359..2412613 (-)	255	WP_001832461.1	GlsB/YeaQ/YmgE family stress response membrane protein	-
ACMUKF_RS11545 (ACMUKF_11545)	-	2412835..2413095 (+)	261	WP_001830921.1	hypothetical protein	-
ACMUKF_RS11550 (ACMUKF_11550)	-	2413209..2413381 (+)	173	Protein_2225	XRE family transcriptional regulator	-
ACMUKF_RS11555 (ACMUKF_11555)	rpsR	2413565..2413807 (-)	243	WP_001831354.1	30S ribosomal protein S18	-
ACMUKF_RS11560 (ACMUKF_11560)	ssbA	2413852..2414361 (-)	510	WP_001831333.1	single-stranded DNA-binding protein	Machinery gene
ACMUKF_RS11565 (ACMUKF_11565)	rpsF	2414384..2414680 (-)	297	WP_001831345.1	30S ribosomal protein S6	-
ACMUKF_RS11570 (ACMUKF_11570)	-	2415065..2415874 (+)	810	WP_002470454.1	GH25 family lysozyme	-
ACMUKF_RS11575 (ACMUKF_11575)	-	2415948..2416139 (+)	192	WP_001831355.1	hypothetical protein	-
ACMUKF_RS11580 (ACMUKF_11580)	ychF	2416372..2417469 (-)	1098	WP_032606537.1	redox-regulated ATPase YchF	-
ACMUKF_RS11585 (ACMUKF_11585)	-	2417481..2417684 (-)	204	WP_001831361.1	DUF951 domain-containing protein	-
ACMUKF_RS11590 (ACMUKF_11590)	-	2417705..2418580 (-)	876	WP_001832526.1	mechanosensitive ion channel family protein	-

Sequence

Protein

• Length: 169 a.a.
• Molecular weight: 18680.20 Da
• Isoelectric Point: 4.9056

>NTDB_id=1094275 ACMUKF_RS11560 WP_001831333.1 2413852..2414361(-) (ssbA) [Staphylococcus epidermidis strain 1457_SeCI_SE48]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQAENVNNYLSKGSLAGVDGRIQSR
SYENQEGRRIFVTEVVCDSVQFLEPKNAQHGGQRSQNNNFQDYGQGFGGQQSGQNTSYNNNNSSNSNQSDNPFANANGPI
DISDDDLPF

Nucleotide

• Length: 510 bp

>NTDB_id=1094275 ACMUKF_RS11560 WP_001831333.1 2413852..2414361(-) (ssbA) [Staphylococcus epidermidis strain 1457_SeCI_SE48]
ATGTTAAATCGAGTTGTATTAGTAGGTCGTCTAACGAAAGATCCAGAATACAGAACCACACCCTCAGGCGTAAGTGTAGC
GACATTTACTCTAGCAGTTAATCGTACTTTCACGAATGCTCAAGGGGAACGCGAAGCTGACTTTATTAACTGTGTAGTCT
TCCGTAGACAAGCAGAAAATGTAAATAACTACTTGTCTAAAGGTAGTTTAGCTGGCGTTGATGGTCGCATACAATCACGT
AGTTATGAAAATCAAGAAGGTCGTCGTATTTTTGTTACTGAAGTCGTATGTGATAGTGTTCAGTTCCTTGAACCTAAAAA
TGCACAACATGGTGGCCAACGTTCACAGAACAATAATTTCCAAGACTACGGTCAAGGATTTGGTGGTCAGCAATCAGGAC
AAAATACATCTTACAACAACAATAATTCATCAAACTCAAATCAGTCGGATAATCCGTTTGCAAATGCTAATGGACCGATT
GATATCAGTGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A2G7I1N0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	64.607	100	0.68
ssb	Latilactobacillus sakei subsp. sakei 23K	55.172	100	0.568
ssbB	Bacillus subtilis subsp. subtilis str. 168	60.377	62.722	0.379