Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   ACMHYC_RS15665 Genome accession   NZ_CP180027
Coordinates   3315630..3316013 (-) Length   127 a.a.
NCBI ID   WP_004652356.1    Uniprot ID   A0A2N0WJ47
Organism   Acinetobacter courvalinii isolate 2024CK-01798     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 3310630..3321013
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMHYC_RS15650 (ACMHYC_15650) - 3312536..3314617 (-) 2082 WP_005226966.1 methyl-accepting chemotaxis protein -
  ACMHYC_RS15655 (ACMHYC_15655) - 3314665..3315201 (-) 537 WP_005226965.1 chemotaxis protein CheW -
  ACMHYC_RS15660 (ACMHYC_15660) - 3315247..3315609 (-) 363 WP_004775365.1 response regulator -
  ACMHYC_RS15665 (ACMHYC_15665) pilG 3315630..3316013 (-) 384 WP_004652356.1 twitching motility response regulator PilG Regulator
  ACMHYC_RS15670 (ACMHYC_15670) - 3316293..3316937 (+) 645 WP_414659408.1 hypothetical protein -
  ACMHYC_RS15675 (ACMHYC_15675) - 3317153..3318868 (+) 1716 WP_199949510.1 proline--tRNA ligase -
  ACMHYC_RS15680 (ACMHYC_15680) - 3318926..3319261 (-) 336 WP_199949511.1 YegP family protein -
  ACMHYC_RS15685 (ACMHYC_15685) - 3319413..3319757 (-) 345 WP_199949512.1 zinc ribbon domain-containing protein YjdM -
  ACMHYC_RS15690 (ACMHYC_15690) - 3319810..3320166 (-) 357 WP_199949513.1 DUF488 domain-containing protein -
  ACMHYC_RS15695 (ACMHYC_15695) - 3320191..3320529 (-) 339 WP_199949514.1 DUF2004 domain-containing protein -

Sequence


Protein


Download         Length: 127 a.a.        Molecular weight: 14226.35 Da        Isoelectric Point: 4.7278

>NTDB_id=1094099 ACMHYC_RS15665 WP_004652356.1 3315630..3316013(-) (pilG) [Acinetobacter courvalinii isolate 2024CK-01798]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSLNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1094099 ACMHYC_RS15665 WP_004652356.1 3315630..3316013(-) (pilG) [Acinetobacter courvalinii isolate 2024CK-01798]
ATGGAAGATAAATTTCAGAATTTAAAGGTGATGGTGATTGACGATTCCAAAACGATTCGTCGTACAGCTGAAACGTTATT
GCAACGTGAAGGCTGTGAAGTCATTACGGCGGTTGATGGCTTTGAAGCATTGTCAAAAATTGCAGAAGCTAATCCGGATA
TCGTTTTTGTTGACATCATGATGCCTCGTTTAGACGGTTACCAAACCTGTGCATTAATCAAAAACTCACTAAATTACCAG
AATATTCCAGTCATTATGTTATCAAGCAAAGACGGTTTGTTTGATCAGGCGAAAGGCCGTGTCGTGGGTTCGGATGAATA
TTTAACCAAGCCATTCAGTAAAGATGAGTTGTTAAACGCGATTCGCAACCACGTTAGCGCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2N0WJ47

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

97.638

100

0.976

  vicR Streptococcus mutans UA159

42.735

92.126

0.394

  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37


Multiple sequence alignment