Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACMG4N_RS02385 Genome accession   NZ_CP179932
Coordinates   511303..511686 (+) Length   127 a.a.
NCBI ID   WP_007148837.1    Uniprot ID   -
Organism   Alcanivorax sp. IL2     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 506303..516686
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACMG4N_RS02360 (ACMG4N_02360) - 506442..507818 (-) 1377 WP_414432815.1 RHS repeat domain-containing protein -
  ACMG4N_RS02365 (ACMG4N_02365) ruvX 507845..508246 (-) 402 WP_414432817.1 Holliday junction resolvase RuvX -
  ACMG4N_RS02370 (ACMG4N_02370) - 508419..508979 (-) 561 WP_297767455.1 YqgE/AlgH family protein -
  ACMG4N_RS02375 (ACMG4N_02375) - 509165..510040 (-) 876 WP_414432820.1 energy transducer TonB -
  ACMG4N_RS02380 (ACMG4N_02380) gshB 510105..511058 (-) 954 WP_297767461.1 glutathione synthase -
  ACMG4N_RS02385 (ACMG4N_02385) pilG 511303..511686 (+) 384 WP_007148837.1 twitching motility response regulator PilG Regulator
  ACMG4N_RS02390 (ACMG4N_02390) pilH 511719..512087 (+) 369 WP_035245814.1 twitching motility response regulator PilH -
  ACMG4N_RS02395 (ACMG4N_02395) - 512103..512651 (+) 549 WP_290511741.1 chemotaxis protein CheW -
  ACMG4N_RS02400 (ACMG4N_02400) - 512711..514735 (+) 2025 WP_297767468.1 methyl-accepting chemotaxis protein -
  ACMG4N_RS02405 (ACMG4N_02405) - 514767..515645 (+) 879 WP_297767471.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 13985.24 Da        Isoelectric Point: 7.8214

>NTDB_id=1093946 ACMG4N_RS02385 WP_007148837.1 511303..511686(+) (pilG) [Alcanivorax sp. IL2]
MTDNFQDLKVMVIDDSKTIRRTAETLLKKAGCEVITATDGFDALAKIADSKPNIIFVDIMMPRLDGYQTCALIKNNSAFK
ATPVIMLSSKDGLFDKAKGRIVGSDEYLTKPFSKDELLGAIRQHING

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1093946 ACMG4N_RS02385 WP_007148837.1 511303..511686(+) (pilG) [Alcanivorax sp. IL2]
ATGACTGACAATTTCCAAGACCTCAAGGTAATGGTGATCGACGATTCCAAAACCATCCGTCGCACCGCTGAAACCTTGTT
GAAGAAAGCAGGTTGTGAAGTGATCACCGCCACCGATGGCTTCGATGCCTTGGCCAAAATCGCCGACAGCAAACCCAATA
TCATCTTCGTCGACATCATGATGCCGCGACTTGACGGGTATCAGACCTGCGCCCTGATCAAGAACAACAGTGCCTTCAAG
GCCACCCCGGTGATCATGCTGTCGTCCAAGGACGGCCTTTTCGACAAGGCCAAGGGGCGGATAGTGGGGTCCGACGAGTA
TCTGACCAAGCCGTTTTCCAAGGACGAGCTTCTCGGCGCGATTCGACAGCATATCAACGGTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.953

100

0.78
  vicR Streptococcus mutans UA159

41.88

92.126

0.386
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37

Multiple sequence alignment