Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ACK8DC_RS03025 | Genome accession | NZ_CP179883 |
| Coordinates | 647792..648202 (+) | Length | 136 a.a. |
| NCBI ID | WP_001200147.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain MRSN15091 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 642792..653202
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK8DC_RS03010 (ACK8DC_03010) | - | 643781..646087 (+) | 2307 | WP_000259109.1 | RelA/SpoT family protein | - |
| ACK8DC_RS03015 (ACK8DC_03015) | - | 646132..646905 (-) | 774 | WP_004748288.1 | SDR family oxidoreductase | - |
| ACK8DC_RS03020 (ACK8DC_03020) | mazG | 647017..647823 (+) | 807 | WP_000359488.1 | nucleoside triphosphate pyrophosphohydrolase | - |
| ACK8DC_RS03025 (ACK8DC_03025) | comEA | 647792..648202 (+) | 411 | WP_001200147.1 | ComEA family DNA-binding protein | Machinery gene |
| ACK8DC_RS03030 (ACK8DC_03030) | pcnB | 648327..649790 (+) | 1464 | WP_001194201.1 | polynucleotide adenylyltransferase PcnB | - |
| ACK8DC_RS03035 (ACK8DC_03035) | folK | 649787..650269 (+) | 483 | WP_000219221.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| ACK8DC_RS03040 (ACK8DC_03040) | panB | 650315..651124 (+) | 810 | WP_000624763.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
| ACK8DC_RS03045 (ACK8DC_03045) | panC | 651128..651976 (+) | 849 | WP_004748285.1 | pantoate--beta-alanine ligase | - |
| ACK8DC_RS03050 (ACK8DC_03050) | rapZ | 651999..652850 (+) | 852 | WP_000821671.1 | RNase adapter RapZ | - |
| ACK8DC_RS03055 (ACK8DC_03055) | - | 652847..653116 (+) | 270 | WP_000567533.1 | HPr family phosphocarrier protein | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 15690.99 Da Isoelectric Point: 10.4475
>NTDB_id=1093392 ACK8DC_RS03025 WP_001200147.1 647792..648202(+) (comEA) [Acinetobacter baumannii strain MRSN15091]
MQYSMRFWKNKYFVLIMLCLGGISPSVYAQSFDKNFQEWKAKQQMYDQKLNISKFSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGIGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL
MQYSMRFWKNKYFVLIMLCLGGISPSVYAQSFDKNFQEWKAKQQMYDQKLNISKFSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGIGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL
Nucleotide
Download Length: 411 bp
>NTDB_id=1093392 ACK8DC_RS03025 WP_001200147.1 647792..648202(+) (comEA) [Acinetobacter baumannii strain MRSN15091]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATGTTGTGCTTGGGGGGAATTTCACCTTCGGT
TTACGCTCAATCTTTTGACAAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCTCTA
AGTTTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCCATTTTTGAAAAAAATAAATCACGTT
TAGCCTTATAA
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATGTTGTGCTTGGGGGGAATTTCACCTTCGGT
TTACGCTCAATCTTTTGACAAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCTCTA
AGTTTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCCATTTTTGAAAAAAATAAATCACGTT
TAGCCTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Acinetobacter baumannii D1279779 |
95.588 |
100 |
0.956 |
| comEA | Acinetobacter baumannii strain A118 |
94.853 |
100 |
0.949 |
| comEA | Acinetobacter baylyi ADP1 |
44.444 |
92.647 |
0.412 |