Detailed information NTG1093340

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: ACK8DD_RS01620
• Genome accession: NZ_CP179880
• Coordinates: 348962..349444 (+)
• Length: 160 a.a.
• NCBI ID: WP_001046413.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain MRSN548254
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 343962..354444

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK8DD_RS01610 (ACK8DD_01610)	pilX	344265..345083 (+)	819	WP_000149377.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
ACK8DD_RS01615 (ACK8DD_01615)	pilY1	345095..348949 (+)	3855	WP_023896142.1	PilC/PilY family type IV pilus protein	Machinery gene
ACK8DD_RS01620 (ACK8DD_01620)	pilY2	348962..349444 (+)	483	WP_001046413.1	type IV pilin protein	Machinery gene
ACK8DD_RS01625 (ACK8DD_01625)	pilE	349441..349866 (+)	426	WP_005130737.1	type IV pilin protein	Machinery gene
ACK8DD_RS01630 (ACK8DD_01630)	rpsP	350013..350264 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
ACK8DD_RS01635 (ACK8DD_01635)	rimM	350284..350832 (+)	549	WP_005130741.1	ribosome maturation factor RimM	-
ACK8DD_RS01640 (ACK8DD_01640)	trmD	350878..351618 (+)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ACK8DD_RS01645 (ACK8DD_01645)	rplS	351826..352194 (+)	369	WP_000014562.1	50S ribosomal protein L19	-
ACK8DD_RS01650 (ACK8DD_01650)	-	352247..353188 (-)	942	WP_098713316.1	lipase family alpha/beta hydrolase	-
ACK8DD_RS01655 (ACK8DD_01655)	-	353303..354337 (-)	1035	WP_046693070.1	lipase secretion chaperone	-

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17602.87 Da
• Isoelectric Point: 8.8351

>NTDB_id=1093340 ACK8DD_RS01620 WP_001046413.1 348962..349444(+) (pilY2) [Acinetobacter baumannii strain MRSN548254]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTRGNLLTNSAANGQTWVIRATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCEANSEVWQ

Nucleotide

• Length: 483 bp

>NTDB_id=1093340 ACK8DD_RS01620 WP_001046413.1 348962..349444(+) (pilY2) [Acinetobacter baumannii strain MRSN548254]
ATGAATAAATACTCTATTCTACGGTTCAATCAGGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACCAGAGGTAATTTATTAACAAATTCTGCTGCTAATGGTCAAAC
ATGGGTAATTAGAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCTGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAGCGAACAGTGAGGTTTGGCAG
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-133)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	93.125	100	0.931
comE	Acinetobacter baylyi ADP1	39.535	100	0.425