Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ACK8DA_RS03015 | Genome accession | NZ_CP179869 |
| Coordinates | 645600..646010 (+) | Length | 136 a.a. |
| NCBI ID | WP_001200147.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain MRSN122172 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 640600..651010
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK8DA_RS03000 (ACK8DA_03000) | - | 641589..643895 (+) | 2307 | WP_000259109.1 | RelA/SpoT family protein | - |
| ACK8DA_RS03005 (ACK8DA_03005) | - | 643940..644713 (-) | 774 | WP_004748288.1 | SDR family oxidoreductase | - |
| ACK8DA_RS03010 (ACK8DA_03010) | mazG | 644825..645631 (+) | 807 | WP_000359488.1 | nucleoside triphosphate pyrophosphohydrolase | - |
| ACK8DA_RS03015 (ACK8DA_03015) | comEA | 645600..646010 (+) | 411 | WP_001200147.1 | ComEA family DNA-binding protein | Machinery gene |
| ACK8DA_RS03020 (ACK8DA_03020) | pcnB | 646135..647598 (+) | 1464 | WP_001194201.1 | polynucleotide adenylyltransferase PcnB | - |
| ACK8DA_RS03025 (ACK8DA_03025) | folK | 647595..648077 (+) | 483 | WP_000219221.1 | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | - |
| ACK8DA_RS03030 (ACK8DA_03030) | panB | 648123..648932 (+) | 810 | WP_000624763.1 | 3-methyl-2-oxobutanoate hydroxymethyltransferase | - |
| ACK8DA_RS03035 (ACK8DA_03035) | panC | 648936..649784 (+) | 849 | WP_004748285.1 | pantoate--beta-alanine ligase | - |
| ACK8DA_RS03040 (ACK8DA_03040) | rapZ | 649807..650658 (+) | 852 | WP_000821671.1 | RNase adapter RapZ | - |
| ACK8DA_RS03045 (ACK8DA_03045) | - | 650655..650924 (+) | 270 | WP_000567533.1 | HPr family phosphocarrier protein | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 15690.99 Da Isoelectric Point: 10.4475
>NTDB_id=1093200 ACK8DA_RS03015 WP_001200147.1 645600..646010(+) (comEA) [Acinetobacter baumannii strain MRSN122172]
MQYSMRFWKNKYFVLIMLCLGGISPSVYAQSFDKNFQEWKAKQQMYDQKLNISKFSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGIGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL
MQYSMRFWKNKYFVLIMLCLGGISPSVYAQSFDKNFQEWKAKQQMYDQKLNISKFSHSNGSKISQTKNFNDSTGQIHLNQ
ANVNEFQQLKGIGEKKAQAIVEYRQKNGSFKNIDEIKNVKGIGPAIFEKNKSRLAL
Nucleotide
Download Length: 411 bp
>NTDB_id=1093200 ACK8DA_RS03015 WP_001200147.1 645600..646010(+) (comEA) [Acinetobacter baumannii strain MRSN122172]
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATGTTGTGCTTGGGGGGAATTTCACCTTCGGT
TTACGCTCAATCTTTTGACAAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCTCTA
AGTTTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCCATTTTTGAAAAAAATAAATCACGTT
TAGCCTTATAA
ATGCAATACAGCATGAGATTTTGGAAAAATAAGTATTTTGTTTTAATAATGTTGTGCTTGGGGGGAATTTCACCTTCGGT
TTACGCTCAATCTTTTGACAAAAACTTTCAAGAATGGAAGGCTAAACAGCAGATGTATGACCAAAAGTTAAACATCTCTA
AGTTTTCTCATTCTAATGGTTCTAAAATTTCTCAAACTAAAAATTTTAATGACTCTACAGGGCAAATTCATTTGAATCAG
GCGAATGTAAATGAGTTTCAGCAGTTAAAAGGTATAGGTGAGAAAAAGGCTCAAGCGATTGTAGAATACAGACAAAAGAA
CGGTAGCTTTAAAAATATTGACGAAATTAAAAACGTTAAAGGAATTGGACCAGCCATTTTTGAAAAAAATAAATCACGTT
TAGCCTTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Acinetobacter baumannii D1279779 |
95.588 |
100 |
0.956 |
| comEA | Acinetobacter baumannii strain A118 |
94.853 |
100 |
0.949 |
| comEA | Acinetobacter baylyi ADP1 |
44.444 |
92.647 |
0.412 |