Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ACK25W_RS14310 Genome accession   NZ_CP179722
Coordinates   2783116..2785428 (-) Length   770 a.a.
NCBI ID   WP_066030466.1    Uniprot ID   -
Organism   Bacillus pumilus strain FJAT-56819     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2778116..2790428
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK25W_RS14270 (ACK25W_14270) - 2778506..2778937 (+) 432 WP_066030470.1 Na(+)/H(+) antiporter subunit B -
  ACK25W_RS14275 (ACK25W_14275) - 2778937..2779278 (+) 342 WP_066030469.1 Na(+)/H(+) antiporter subunit C -
  ACK25W_RS14280 (ACK25W_14280) - 2779271..2780749 (+) 1479 WP_066030468.1 Na+/H+ antiporter subunit D -
  ACK25W_RS14285 (ACK25W_14285) - 2780756..2781235 (+) 480 WP_278022938.1 Na+/H+ antiporter subunit E -
  ACK25W_RS14290 (ACK25W_14290) - 2781235..2781516 (+) 282 WP_012011105.1 Na(+)/H(+) antiporter subunit F1 -
  ACK25W_RS14295 (ACK25W_14295) mnhG 2781500..2781874 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  ACK25W_RS14300 (ACK25W_14300) - 2781981..2782370 (-) 390 WP_003213775.1 hotdog fold thioesterase -
  ACK25W_RS14305 (ACK25W_14305) comA 2782394..2783035 (-) 642 WP_060597210.1 response regulator transcription factor Regulator
  ACK25W_RS14310 (ACK25W_14310) comP 2783116..2785428 (-) 2313 WP_066030466.1 ATP-binding protein Regulator
  ACK25W_RS14315 (ACK25W_14315) comX 2785485..2785652 (-) 168 WP_081311380.1 competence pheromone ComX -
  ACK25W_RS14320 (ACK25W_14320) - 2785649..2786563 (-) 915 WP_081311379.1 polyprenyl synthetase family protein -
  ACK25W_RS14325 (ACK25W_14325) degQ 2786715..2786855 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  ACK25W_RS14330 (ACK25W_14330) - 2787361..2787714 (+) 354 WP_060597216.1 hypothetical protein -
  ACK25W_RS14335 (ACK25W_14335) - 2787748..2788974 (-) 1227 WP_106072124.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 770 a.a.        Molecular weight: 89401.94 Da        Isoelectric Point: 8.0506

>NTDB_id=1092869 ACK25W_RS14310 WP_066030466.1 2783116..2785428(-) (comP) [Bacillus pumilus strain FJAT-56819]
MKLTYTKLSRFLVFLSFLFVIYISYIYVFDIFNGARVEKNENGQTEVVDVEYLSLAYSSGLKEGDIILKINGQSNLIQDH
MINGKLRNVQRIDIQRGNQIISLKNKTLIGRESLFVYLIPLLLYSICLFCIFFIIKINKEPQRKSAFLLILFLLSICIGY
LSAGTSGIGDRFSHYVLLLCLSSVSILYIHFIYQYFKEFDVHLTNPKLIRYLYLIPIFNLAVHSGVSVSSELRKYVPSIS
LLFFFGTVLVALYLIVRGMKKYKKTAHGSVLKFFAIMNVLSFSPFILFFVIPYVFFDKYLIDPFILTSIVLLIPFSLVYQ
FMTNKLYNMDFLISRLRYYGFLAITPTIFVVVTFYILQKPEDLKYTLKLALITYALMLAVFYFKEILDFRFRLKRFSEKH
NYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKPDGQIEEIDESSGDSNLWKEYVDQFQDILGEVGKI
IELDKGFMMKIGERGGHSFMICCLSNLQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKV
MFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNDQCPTSIEQSLISWNEQMSKVIQTTRETCHELRPQLLYDL
GLVKAMSKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSQASQVLVMLICIKDQVVLHYEDD
GVGFDASHLDQHTMSMGLSGIRERVKALNGKLHIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2313 bp        

>NTDB_id=1092869 ACK25W_RS14310 WP_066030466.1 2783116..2785428(-) (comP) [Bacillus pumilus strain FJAT-56819]
ATGAAGCTTACCTATACAAAATTGTCCAGGTTTCTTGTATTTTTATCTTTTTTATTTGTGATCTATATTTCATATATCTA
TGTATTTGATATTTTTAATGGTGCACGTGTAGAAAAGAATGAAAACGGTCAAACGGAAGTTGTTGACGTTGAATATCTTT
CTTTAGCTTATTCGTCGGGGTTAAAAGAAGGAGATATTATACTAAAGATAAACGGACAATCTAATTTAATTCAAGACCAC
ATGATCAATGGTAAGCTTAGAAATGTACAAAGAATTGATATACAAAGAGGCAACCAAATCATATCACTTAAAAATAAGAC
GTTGATTGGTCGCGAAAGCTTATTTGTCTATTTAATCCCTCTTCTTCTATATTCAATATGCTTATTCTGTATCTTTTTTA
TTATTAAAATTAACAAAGAACCGCAACGAAAATCTGCATTTTTATTAATTTTATTCTTATTGTCAATTTGTATTGGGTAT
CTGAGTGCAGGTACGTCAGGAATTGGTGATAGATTTAGCCATTATGTTCTCTTATTGTGTTTATCAAGTGTGTCTATCTT
ATATATTCATTTTATCTATCAATATTTCAAGGAATTTGATGTGCATTTAACGAATCCAAAGCTCATCAGGTACTTATATT
TGATCCCTATTTTTAACCTTGCCGTACATAGCGGGGTTTCGGTGTCATCTGAATTGAGAAAATATGTTCCTAGTATCAGT
TTGCTGTTTTTTTTCGGAACAGTTTTAGTAGCTCTTTATTTAATAGTCAGAGGAATGAAGAAATATAAAAAAACAGCACA
TGGTTCAGTTTTAAAGTTTTTTGCCATTATGAATGTTTTGTCGTTCAGTCCATTCATTCTCTTTTTTGTTATTCCCTATG
TGTTTTTTGATAAGTATTTGATTGATCCTTTTATTCTGACATCAATCGTTTTGTTAATTCCTTTTTCTCTCGTCTACCAA
TTCATGACGAACAAACTTTACAATATGGATTTTTTGATTAGCAGACTGAGGTACTATGGCTTTCTAGCCATCACACCGAC
CATTTTTGTTGTTGTCACGTTTTATATTCTGCAAAAACCAGAAGATTTGAAGTACACACTGAAGCTCGCATTAATCACCT
ACGCGCTCATGCTGGCTGTTTTCTATTTCAAAGAAATTCTAGATTTCCGTTTTCGTCTGAAGCGTTTTTCAGAGAAGCAT
AATTACCAGGACAGCGTGTTTAAATTTACGCAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTGCTGTATCATTTGAA
ATACACCATTTTAGAAGTGCTTGTTGTTAATAAAGCCTTTGTGCTTGAAGTGAAGCCAGATGGGCAGATTGAAGAGATTG
ATGAATCTTCAGGTGATAGCAATCTATGGAAAGAGTATGTGGATCAATTTCAGGATATTTTAGGGGAAGTCGGGAAAATC
ATTGAGCTTGATAAAGGGTTTATGATGAAAATTGGCGAGCGGGGCGGTCACTCGTTTATGATTTGCTGTTTATCCAATTT
ACAGACACCGAAATTGACGCGTGATGAGATTTCTTGGCTGAAAACATTGGCTTTTTACACAAGTGTCAGTTTAGAAAATG
TCGTCAAGATCGAAGAATTGATGGAGCATCTTGAAGATTTGAAGCAGCGTGAAGCGAACCCTGCTTGGCTGAAAAAAGTC
ATGTTTGCGATGGAAGAAAAGCAGCGCTCCGATTTAGCGAGGGATCTTCATGATTCCGTGCTGCAGGATTTGATATCGCT
GAAAAGACAGTCAGAGATGTTTTTAACGAATTTCCAAAACGATCAATGCCCAACGTCTATTGAACAATCGCTTATCTCAT
GGAATGAACAAATGTCTAAGGTGATTCAAACCACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTGCTGTACGATTTA
GGTTTAGTCAAGGCGATGTCGAAGCTGACTTCTCAAATCCAGGAGGAAGCACCGTTTCATATCCGGCTGAATACGACTCG
CTTTGATAAGGAGCTGGACATTGATATTGACTCCCAGCTCAATATTTACCGGATTGTTCAGGAGCTGTTATCCAATGCCT
TGAAACATTCTCAAGCCAGCCAAGTGCTTGTGATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTACGAGGATGAT
GGAGTCGGTTTTGATGCAAGCCATCTTGATCAGCACACCATGAGCATGGGCCTCTCGGGAATCAGAGAACGAGTCAAGGC
GTTAAATGGGAAGCTTCACATTCACACAGCCCCAGAAAAAGGGCTGAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.032

100

0.494


Multiple sequence alignment