Detailed information NTG1091815

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ACLKL2_RS09110
• Genome accession: NZ_CP178827
• Coordinates: 1904843..1905952 (-)
• Length: 369 a.a.
• NCBI ID: WP_413694150.1
• Uniprot ID: -
• Organism: Pseudoalteromonas sp. KJ10-2
• Function: type IV pilus retraction (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1899843..1910952

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLKL2_RS09080 (ACLKL2_09080)	-	1899910..1900086 (-)	177	WP_413694148.1	hypothetical protein	-
ACLKL2_RS09085 (ACLKL2_09085)	-	1900251..1901966 (+)	1716	WP_113819246.1	proline--tRNA ligase	-
ACLKL2_RS09090 (ACLKL2_09090)	-	1902103..1902426 (+)	324	WP_413694149.1	alpha/beta fold hydrolase	-
ACLKL2_RS09095 (ACLKL2_09095)	-	1902419..1903095 (+)	677	Protein_1773	alpha/beta fold hydrolase	-
ACLKL2_RS09100 (ACLKL2_09100)	-	1903102..1903899 (+)	798	WP_113819244.1	Cof-type HAD-IIB family hydrolase	-
ACLKL2_RS09105 (ACLKL2_09105)	yaaA	1904001..1904776 (-)	776	Protein_1775	peroxide stress protein YaaA	-
ACLKL2_RS09110 (ACLKL2_09110)	pilU	1904843..1905952 (-)	1110	WP_413694150.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ACLKL2_RS09115 (ACLKL2_09115)	-	1905962..1906997 (-)	1036	Protein_1777	type IV pilus twitching motility protein PilT	-
ACLKL2_RS09120 (ACLKL2_09120)	-	1907018..1907710 (+)	693	WP_113819240.1	YggS family pyridoxal phosphate-dependent enzyme	-
ACLKL2_RS09125 (ACLKL2_09125)	proC	1907735..1908558 (+)	824	Protein_1779	pyrroline-5-carboxylate reductase	-
ACLKL2_RS09130 (ACLKL2_09130)	-	1908596..1909141 (+)	546	WP_113819238.1	YggT family protein	-
ACLKL2_RS09135 (ACLKL2_09135)	-	1909307..1909918 (+)	612	WP_113819237.1	XTP/dITP diphosphatase	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 40569.25 Da
• Isoelectric Point: 6.0870

>NTDB_id=1091815 ACLKL2_RS09110 WP_413694150.1 1904843..1905952(-) (pilU) [Pseudoalteromonas sp. KJ10-2]
MLDKLLGSLDQLKASDLYISAGLPPTVKLNGRLSSLSDDNMAPEDIYNLLALTMDEHDFAQFKSQKEANFAIHIEGLGRF
RISAFMQKSSPGMVVRRINDRIPTSDELYLPDQLKEICMAKSGLVLFVGPTGSGKSTTLAAMVGFRNQHASGHILTIEDP
IEFVHEHARSVVTQREVGLDTDSIEEALRNATRQAPDVIVQGEIRSTVSMSHAISHAQTGYLSMATINANSAEKALEQML
HYMPEERHNQFLNELAVNLKAIVAQRLIPTLDEQGSVAAFEVMVNSPALSNAIRKGERHLLKDIMKSSKQAGMQTLDQAL
FKLYSDSKISYSEALAHADSANDLRLMIKLKVGSSSKLASDSLNEFTID

Nucleotide

• Length: 1110 bp

>NTDB_id=1091815 ACLKL2_RS09110 WP_413694150.1 1904843..1905952(-) (pilU) [Pseudoalteromonas sp. KJ10-2]
ATGCTAGATAAATTATTAGGTTCTTTAGATCAGTTAAAAGCCTCAGACTTATACATTTCGGCTGGCTTGCCGCCTACAGT
AAAACTCAATGGGCGTTTATCTTCCTTGTCCGATGATAATATGGCTCCCGAAGATATTTATAATTTATTAGCACTTACTA
TGGATGAACACGACTTCGCCCAATTCAAAAGCCAAAAAGAAGCAAATTTTGCAATTCATATTGAAGGCTTAGGGCGTTTT
CGGATCAGTGCTTTTATGCAAAAAAGTAGCCCAGGTATGGTGGTACGCAGAATCAATGACAGAATTCCTACCAGTGATGA
ATTGTACTTACCAGATCAACTAAAAGAGATCTGTATGGCTAAGTCCGGTTTAGTCTTGTTTGTTGGACCGACTGGCTCAG
GTAAGTCAACAACGCTGGCCGCTATGGTAGGGTTTCGTAACCAACATGCATCCGGGCATATTTTAACCATTGAAGATCCC
ATTGAATTTGTACATGAGCACGCACGTTCAGTAGTAACCCAGCGTGAAGTTGGGTTAGATACTGACTCAATTGAAGAAGC
GTTACGTAATGCAACTCGCCAAGCGCCTGATGTCATTGTACAAGGTGAAATCCGCAGTACAGTGAGTATGTCTCATGCTA
TCAGTCATGCACAAACTGGTTATTTAAGCATGGCGACAATTAATGCTAACAGCGCTGAGAAAGCCTTGGAGCAAATGTTA
CATTATATGCCTGAAGAGCGTCATAACCAGTTTTTAAACGAGCTTGCGGTTAACTTAAAAGCGATTGTTGCACAACGTCT
TATCCCAACATTAGATGAACAAGGTAGTGTGGCTGCTTTTGAGGTGATGGTGAATTCACCTGCATTATCTAATGCAATTC
GAAAGGGTGAGCGCCACCTGTTAAAAGATATTATGAAGTCATCTAAACAAGCGGGAATGCAAACTTTAGATCAAGCGTTA
TTTAAATTATATTCGGACTCAAAAATTAGTTATAGTGAAGCACTAGCACATGCAGATTCAGCCAATGATCTCCGCTTAAT
GATTAAATTAAAAGTGGGCTCAAGTTCTAAACTCGCTTCGGATAGCTTAAATGAGTTTACTATCGACTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (111-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Vibrio cholerae strain A1552	52.446	99.729	0.523
pilU	Pseudomonas stutzeri DSM 10701	52.436	94.58	0.496
pilU	Acinetobacter baylyi ADP1	50.571	94.851	0.48