Detailed information NTG1091036

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: ACLZ8E_RS13140
• Genome accession: NZ_CP178726
• Coordinates: 2665457..2665966 (-)
• Length: 169 a.a.
• NCBI ID: WP_001831333.1
• Uniprot ID: A0A2G7I1N0
• Organism: Staphylococcus epidermidis strain 13.4-1
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2660457..2670966

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLZ8E_RS13095 (ACLZ8E_13095)	-	2660613..2661236 (+)	624	WP_002456828.1	NDxxF motif lipoprotein	-
ACLZ8E_RS13100 (ACLZ8E_13100)	-	2661456..2661833 (+)	378	WP_002437185.1	hypothetical protein	-
ACLZ8E_RS13105 (ACLZ8E_13105)	-	2662249..2662839 (-)	591	WP_002456826.1	histidine phosphatase family protein	-
ACLZ8E_RS13110 (ACLZ8E_13110)	-	2662860..2663492 (-)	633	WP_001830914.1	LysE family translocator	-
ACLZ8E_RS13115 (ACLZ8E_13115)	-	2663655..2663744 (+)	90	Protein_2541	hypothetical protein	-
ACLZ8E_RS13120 (ACLZ8E_13120)	-	2663964..2664218 (-)	255	WP_001832461.1	GlsB/YeaQ/YmgE family stress response membrane protein	-
ACLZ8E_RS13125 (ACLZ8E_13125)	-	2664440..2664700 (+)	261	WP_001830921.1	hypothetical protein	-
ACLZ8E_RS13130 (ACLZ8E_13130)	-	2664814..2664986 (+)	173	Protein_2544	XRE family transcriptional regulator	-
ACLZ8E_RS13135 (ACLZ8E_13135)	rpsR	2665170..2665412 (-)	243	WP_001831354.1	30S ribosomal protein S18	-
ACLZ8E_RS13140 (ACLZ8E_13140)	ssbA	2665457..2665966 (-)	510	WP_001831333.1	single-stranded DNA-binding protein	Machinery gene
ACLZ8E_RS13145 (ACLZ8E_13145)	rpsF	2665989..2666285 (-)	297	WP_001831345.1	30S ribosomal protein S6	-
ACLZ8E_RS13150 (ACLZ8E_13150)	-	2666670..2667479 (+)	810	WP_001831342.1	GH25 family lysozyme	-
ACLZ8E_RS13155 (ACLZ8E_13155)	-	2667553..2667744 (+)	192	WP_001831355.1	hypothetical protein	-
ACLZ8E_RS13160 (ACLZ8E_13160)	ychF	2667977..2669074 (-)	1098	WP_001831336.1	redox-regulated ATPase YchF	-
ACLZ8E_RS13165 (ACLZ8E_13165)	-	2669086..2669289 (-)	204	WP_001831361.1	DUF951 domain-containing protein	-
ACLZ8E_RS13170 (ACLZ8E_13170)	-	2669310..2670185 (-)	876	WP_002468622.1	mechanosensitive ion channel family protein	-

Sequence

Protein

• Length: 169 a.a.
• Molecular weight: 18680.20 Da
• Isoelectric Point: 4.9056

>NTDB_id=1091036 ACLZ8E_RS13140 WP_001831333.1 2665457..2665966(-) (ssbA) [Staphylococcus epidermidis strain 13.4-1]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQAENVNNYLSKGSLAGVDGRIQSR
SYENQEGRRIFVTEVVCDSVQFLEPKNAQHGGQRSQNNNFQDYGQGFGGQQSGQNTSYNNNNSSNSNQSDNPFANANGPI
DISDDDLPF

Nucleotide

• Length: 510 bp

>NTDB_id=1091036 ACLZ8E_RS13140 WP_001831333.1 2665457..2665966(-) (ssbA) [Staphylococcus epidermidis strain 13.4-1]
ATGTTAAATCGAGTTGTATTAGTAGGTCGTCTAACGAAAGATCCAGAATACAGAACCACACCCTCAGGCGTAAGTGTAGC
GACATTTACTCTAGCAGTTAATCGTACTTTCACGAATGCTCAAGGGGAACGAGAAGCTGACTTTATTAACTGTGTAGTCT
TCCGTAGACAAGCAGAAAATGTAAATAACTACTTGTCTAAAGGTAGTTTAGCTGGCGTTGATGGTCGCATACAATCACGT
AGTTATGAAAATCAAGAAGGTCGTCGTATTTTTGTTACTGAAGTCGTATGTGATAGTGTTCAGTTCCTTGAACCTAAAAA
TGCACAACATGGTGGCCAACGTTCACAGAACAATAATTTCCAAGACTACGGTCAAGGATTTGGTGGTCAGCAATCAGGAC
AAAATACATCTTACAACAACAATAATTCATCAAACTCAAATCAGTCGGATAATCCGTTTGCAAATGCTAATGGACCGATT
GATATCAGTGATGATGATTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A2G7I1N0

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	64.607	100	0.68
ssb	Latilactobacillus sakei subsp. sakei 23K	55.172	100	0.568
ssbB	Bacillus subtilis subsp. subtilis str. 168	60.377	62.722	0.379