Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   ACL66B_RS18395 Genome accession   NZ_CP178617
Coordinates   3531800..3532957 (-) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus subtilis strain QXKL-3     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 3526800..3537957
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACL66B_RS18365 (ACL66B_18365) yvyF 3527053..3527472 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  ACL66B_RS18370 (ACL66B_18370) comFC 3527546..3528268 (-) 723 WP_014481051.1 comF operon protein ComFC Machinery gene
  ACL66B_RS18375 (ACL66B_18375) comFB 3528232..3528528 (-) 297 WP_003227989.1 late competence protein ComFB -
  ACL66B_RS18380 (ACL66B_18380) comFA 3528588..3529979 (-) 1392 WP_041850475.1 ATP-dependent helicase ComFA Machinery gene
  ACL66B_RS18385 (ACL66B_18385) fakBA 3530085..3530930 (-) 846 WP_003227986.1 DegV family protein -
  ACL66B_RS18390 (ACL66B_18390) degU 3531028..3531717 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  ACL66B_RS18395 (ACL66B_18395) degS 3531800..3532957 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  ACL66B_RS18400 (ACL66B_18400) yvyE 3533174..3533827 (+) 654 WP_003227979.1 YigZ family protein -
  ACL66B_RS18405 (ACL66B_18405) tagV 3533827..3535011 (+) 1185 WP_041850474.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  ACL66B_RS18410 (ACL66B_18410) tagO 3535084..3536160 (-) 1077 WP_003227975.1 MraY family glycosyltransferase -
  ACL66B_RS18415 (ACL66B_18415) tuaH 3536305..3537498 (-) 1194 WP_080332566.1 teichuronic acid biosynthesis protein TuaH -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=1090592 ACL66B_RS18395 WP_003227983.1 3531800..3532957(-) (degS) [Bacillus subtilis strain QXKL-3]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=1090592 ACL66B_RS18395 WP_003227983.1 3531800..3532957(-) (degS) [Bacillus subtilis strain QXKL-3]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAAGTTTTTCAAATCGGTGAGCAGTCACGCCAGCAGTATGAACAGCTGGTTGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCAGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment