Detailed information NTG1090394

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACJQW4_RS04140
• Genome accession: NZ_CP178606
• Coordinates: 884499..885845 (+)
• Length: 448 a.a.
• NCBI ID: WP_241628334.1
• Uniprot ID: -
• Organism: Acinetobacter sp. A7.4
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 879499..890845

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJQW4_RS04120 (ACJQW4_04120)	thrC	879588..880727 (+)	1140	WP_241628280.1	threonine synthase	-
ACJQW4_RS04125 (ACJQW4_04125)	pbpG	880908..881966 (-)	1059	WP_241628279.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
ACJQW4_RS04130 (ACJQW4_04130)	-	882183..882818 (+)	636	WP_100242578.1	response regulator	-
ACJQW4_RS04135 (ACJQW4_04135)	pilS	882854..884413 (+)	1560	WP_241628278.1	sensor histidine kinase	Regulator
ACJQW4_RS04140 (ACJQW4_04140)	pilR	884499..885845 (+)	1347	WP_241628334.1	sigma-54-dependent transcriptional regulator	Regulator
ACJQW4_RS04145 (ACJQW4_04145)	-	885846..887012 (-)	1167	WP_241628277.1	S41 family peptidase	-
ACJQW4_RS04150 (ACJQW4_04150)	gpmI	887036..888583 (-)	1548	WP_241628276.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
ACJQW4_RS04155 (ACJQW4_04155)	lptG	888706..889776 (-)	1071	WP_241628275.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 448 a.a.
• Molecular weight: 50598.24 Da
• Isoelectric Point: 6.5822

>NTDB_id=1090394 ACJQW4_RS04140 WP_241628334.1 884499..885845(+) (pilR) [Acinetobacter sp. A7.4]
MQMMLSRMGIETHVAYRLSQARKMLSEHQYDVCFTDLNLPDGNGLELVEEISQQYPQLPVAVLTAYGNMDIAIAALKAGA
FDFVSKPIKQTHLEQLLQKALNKPLQQAQQEDALEQRMLIGQSLPIQQLRVTLNKIARSQAPVFITGESGTGKEVVANLV
HRLSNRNEGPFIAINCGAIPTDLLESELFGHKKGSFTGATQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRAVQEKSI
RPIGSETEIDVDFRVISASHQDLESLVQQGKFRQDLFFRIHVMDLVLPPLRERGQDILILAQHFIQKVSREWEIPAKALT
PRAKEFLLAQYYPGNVRELRNIIERAITLSDEDYIDVQHLQSAPLRRSVQMQTPSVDQMLTTSSELTLSSKKLPDEGLEL
YLENIEKEILLNALNITHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1347 bp

>NTDB_id=1090394 ACJQW4_RS04140 WP_241628334.1 884499..885845(+) (pilR) [Acinetobacter sp. A7.4]
ATGCAAATGATGTTGAGTCGTATGGGGATTGAAACGCATGTGGCCTATCGTTTGTCACAGGCACGCAAAATGTTATCTGA
ACATCAATATGATGTGTGTTTCACCGATCTAAACTTGCCTGATGGCAATGGTTTAGAACTGGTTGAAGAAATTTCACAAC
AATATCCTCAACTCCCAGTTGCCGTGCTAACAGCATATGGCAATATGGATATTGCGATTGCAGCCCTCAAAGCAGGTGCT
TTTGACTTTGTCAGCAAACCGATCAAACAAACCCATCTTGAACAGCTACTACAAAAAGCCTTGAATAAACCGCTACAGCA
AGCTCAACAAGAAGATGCACTTGAACAACGTATGCTGATTGGGCAGTCTTTACCGATTCAACAACTGCGCGTGACCTTAA
ACAAGATCGCTCGCTCACAAGCCCCCGTGTTTATTACAGGTGAATCTGGTACAGGCAAAGAAGTAGTTGCCAATCTGGTG
CACCGTTTAAGTAATCGTAATGAAGGTCCTTTTATTGCCATTAACTGTGGTGCCATTCCTACGGATTTACTCGAAAGTGA
ATTATTCGGACACAAAAAAGGCAGCTTTACTGGTGCAACACAAGACAAACAAGGTCTAATCCAGTCCGCACATGGCGGCA
GTTTATTTCTGGATGAAATTGCAGAACTTCCATTGAATATGCAAGTTAAACTCTTGCGTGCAGTGCAGGAAAAATCTATC
CGCCCAATTGGTTCCGAAACTGAAATTGATGTCGATTTCCGAGTAATCAGTGCCAGTCATCAAGACTTAGAAAGCTTGGT
ACAACAGGGCAAATTCCGACAAGACCTGTTTTTCCGAATTCATGTCATGGACTTAGTCCTGCCACCGCTACGAGAACGTG
GTCAGGATATCCTGATTCTGGCACAACATTTTATTCAAAAGGTCAGCCGTGAATGGGAAATTCCAGCCAAAGCCTTAACT
CCACGTGCCAAAGAGTTTTTACTTGCCCAGTATTATCCAGGCAATGTCCGTGAACTGCGCAACATCATCGAACGTGCCAT
TACCTTAAGTGATGAAGATTATATTGATGTGCAGCATTTACAAAGCGCACCGCTTCGCCGCAGTGTCCAGATGCAAACCC
CTTCAGTCGATCAGATGTTGACGACTTCTTCAGAACTCACCCTGAGTTCGAAGAAATTACCTGATGAAGGTCTGGAGCTG
TATTTAGAGAATATCGAGAAAGAAATTCTGTTGAATGCACTCAACATCACCCACTGGAATCGTACCTTAGCGGCGAAAAA
ACTGGGGATGTCTTTCCGCTCTTTACGCTATCGTCTGAAGAAGTTTGGACTGGATACCGATGAATAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (2-97)

• Sigma-54 interaction domain (Sigma54_activat) (119-285)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.33	100	0.743
pilR	Pseudomonas aeruginosa PAK	49.103	99.554	0.489