Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   ACJQW4_RS00235 Genome accession   NZ_CP178606
Coordinates   48348..50756 (-) Length   802 a.a.
NCBI ID   WP_241627639.1    Uniprot ID   -
Organism   Acinetobacter sp. A7.4     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 43348..55756
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJQW4_RS00210 (ACJQW4_00210) purM 43707..44777 (+) 1071 WP_100240995.1 phosphoribosylformylglycinamidine cyclo-ligase -
  ACJQW4_RS00215 (ACJQW4_00215) purN 44774..45406 (+) 633 WP_241627811.1 phosphoribosylglycinamide formyltransferase -
  ACJQW4_RS00220 (ACJQW4_00220) - 45450..46253 (-) 804 WP_241627633.1 alpha/beta fold hydrolase -
  ACJQW4_RS00225 (ACJQW4_00225) sppA 46250..47275 (-) 1026 WP_241627635.1 signal peptide peptidase SppA -
  ACJQW4_RS00230 (ACJQW4_00230) - 47405..48346 (+) 942 WP_241627637.1 lysophospholipid acyltransferase family protein -
  ACJQW4_RS00235 (ACJQW4_00235) comA/comEC 48348..50756 (-) 2409 WP_241627639.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACJQW4_RS00240 (ACJQW4_00240) lolD 50839..51525 (-) 687 WP_241627641.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  ACJQW4_RS00245 (ACJQW4_00245) - 51518..52753 (-) 1236 WP_241627644.1 lipoprotein-releasing ABC transporter permease subunit -
  ACJQW4_RS00250 (ACJQW4_00250) - 52779..53348 (+) 570 WP_241627646.1 PilZ domain-containing protein -
  ACJQW4_RS00255 (ACJQW4_00255) - 53358..54269 (-) 912 WP_241627648.1 DMT family transporter -
  ACJQW4_RS00260 (ACJQW4_00260) - 54282..54752 (-) 471 WP_241627650.1 YaiI/YqxD family protein -

Sequence


Protein


Download         Length: 802 a.a.        Molecular weight: 91898.87 Da        Isoelectric Point: 8.1256

>NTDB_id=1090382 ACJQW4_RS00235 WP_241627639.1 48348..50756(-) (comA/comEC) [Acinetobacter sp. A7.4]
MMQYALLAWILGMTGMGEVWSLTSATCVTFAVLWIINQILALKLPNFKPQFVRFLSISFLCLFSFNLAYLYADHALTERM
ALRELTSKSAEVIVHVKNLNVIQSNHIQQQVMVLDYRKQPVKWLAYIQPSSKTPLELGQYYRLRGKILPAHSYAIEGAFD
QEKWFLQQNIMSAFQVQEIERLSEQQLYAVGQMSYLRQQQSSTAKFLLAIERQRLSLRNTLRDQSLHNTGLLLALLTGDQ
SLLSPDVEDLFKRMGLSHLLAISGPHVLIFAALLCWSLHRLIIRFNPTWYLHYPKPYLLVLPFCMGVLLYSAFVGFEIPA
LRTLFTSLIITVLILCKFKLQPVQILLFSAAILLFFDPFSILSAAFWLSYGACLVLLRIYQTLQQQPTQVAETRLRQLKS
YVVLLFESQWKIFIALLPLMLIFFQQVVWIAPFSNIVALPWLSILVVPLSIIATLCLWIFKPLGLLLFQLNDFSLSLLLS
ILNGADQIVGSTVQSVAMSWAVMFGLILGLCILFLPRGVVPKSWVVVCVLPIFIFDESKQSFELQILDVGQGQAIYLQKQ
DQQMMIDMGGNYDEQKFSVGQQIIRPFLNSKGVSHLDQLILTHLDQDHSGAYYSLRSILPIQTIYSNEKVEVMPESQFHY
CHAGQLWEMEGVKIQVLSPRKEQLAEVSNHQNELSCVLYIQVEHAQPYANFLIMGDAGWETEYQILKAYSDLKVDVLVLG
HHGSKHSSAYDFLKRLKPKIAIASAGFSNRYGHPSILTQQRLNELQIPLYTTIDNGSIQFIQTEDQQIQMQFYRDQQRWL
NR

Nucleotide


Download         Length: 2409 bp        

>NTDB_id=1090382 ACJQW4_RS00235 WP_241627639.1 48348..50756(-) (comA/comEC) [Acinetobacter sp. A7.4]
ATGATGCAATACGCACTACTCGCTTGGATACTCGGCATGACTGGAATGGGGGAGGTCTGGTCACTCACCAGTGCTACATG
TGTCACGTTTGCAGTCTTATGGATTATTAACCAAATACTTGCACTTAAACTTCCAAATTTTAAACCTCAGTTTGTAAGAT
TTTTAAGCATTAGTTTTTTGTGTCTCTTCAGCTTCAATTTAGCTTATTTATATGCAGATCATGCATTGACAGAACGTATG
GCTTTACGTGAATTGACCTCTAAATCCGCCGAAGTCATTGTACATGTCAAAAACTTAAATGTGATTCAATCGAATCACAT
TCAACAACAGGTCATGGTACTAGATTATCGAAAGCAACCTGTGAAATGGTTAGCCTATATCCAACCTTCATCAAAGACAC
CACTTGAGTTAGGACAATACTATCGTTTGCGGGGAAAAATTTTACCTGCACACAGCTATGCAATAGAGGGTGCTTTTGAT
CAAGAAAAATGGTTCTTACAACAGAACATTATGTCTGCCTTTCAAGTGCAGGAGATTGAAAGACTCAGTGAGCAACAACT
TTATGCCGTGGGTCAAATGTCCTATCTGCGGCAGCAACAAAGTTCAACTGCCAAATTTTTATTGGCAATTGAACGGCAAA
GATTAAGCTTGCGTAATACATTAAGGGATCAATCTTTACATAATACAGGCTTACTTTTGGCCTTGTTAACAGGGGATCAA
AGTTTACTCAGTCCTGATGTTGAAGACTTATTTAAACGGATGGGGTTGAGCCATTTATTGGCTATTTCAGGACCGCACGT
GTTGATCTTTGCTGCATTGCTCTGTTGGAGCTTACATCGGCTGATTATCCGTTTTAATCCGACTTGGTATTTGCATTATC
CCAAGCCTTATCTTTTGGTGCTTCCTTTTTGTATGGGGGTACTGCTGTATTCTGCTTTCGTCGGCTTTGAAATTCCAGCA
TTACGTACTTTGTTTACCAGTTTGATTATCACTGTTCTGATTTTATGCAAATTTAAACTGCAACCTGTGCAGATATTGCT
GTTCAGTGCTGCAATATTATTATTCTTTGACCCTTTCAGTATTTTGTCCGCTGCTTTTTGGCTGTCTTATGGGGCTTGTC
TGGTACTACTCAGAATTTATCAGACCTTGCAACAGCAACCTACCCAAGTGGCAGAAACTCGTTTAAGGCAGCTCAAGTCT
TATGTTGTGTTGCTATTCGAGTCACAATGGAAAATATTTATCGCGTTACTTCCGCTCATGCTGATTTTCTTTCAACAAGT
TGTGTGGATTGCGCCATTCAGCAATATTGTGGCATTACCATGGCTCAGTATTTTAGTAGTTCCACTCAGTATTATCGCGA
CCTTGTGTTTATGGATCTTCAAACCGTTAGGATTATTATTGTTCCAACTGAATGATTTCAGTTTGTCATTGTTACTTTCA
ATCCTCAATGGCGCTGATCAGATAGTGGGCTCAACAGTACAGAGTGTTGCCATGAGTTGGGCTGTGATGTTTGGACTCAT
ATTAGGGCTTTGCATTTTGTTCCTACCGCGCGGCGTTGTTCCAAAAAGTTGGGTGGTGGTCTGCGTTTTACCAATATTCA
TTTTCGATGAATCTAAACAGTCTTTTGAATTACAGATCCTTGATGTGGGGCAAGGTCAAGCCATCTATTTGCAAAAGCAA
GATCAGCAGATGATGATTGATATGGGTGGAAATTATGATGAACAGAAATTTAGTGTAGGGCAGCAGATAATACGTCCCTT
TTTGAATAGCAAAGGGGTATCACATTTGGATCAGCTCATTCTGACCCATTTAGATCAAGATCATAGCGGTGCATATTATT
CATTGCGTTCCATTTTGCCCATTCAAACCATTTATAGTAATGAAAAAGTTGAGGTGATGCCTGAATCTCAATTTCACTAT
TGTCACGCAGGACAGCTATGGGAAATGGAAGGCGTCAAGATTCAGGTCTTATCACCACGAAAGGAGCAATTAGCAGAAGT
TTCTAATCATCAGAACGAACTGTCATGTGTGCTTTATATTCAAGTTGAACATGCTCAACCTTATGCCAATTTCTTAATTA
TGGGAGATGCAGGCTGGGAAACCGAATATCAAATTCTAAAAGCCTATTCAGATTTAAAAGTTGATGTGTTGGTATTGGGA
CATCATGGCAGTAAGCATAGTTCAGCTTATGATTTCTTAAAGCGACTCAAGCCGAAAATTGCGATTGCATCGGCAGGATT
CAGCAATCGTTATGGTCACCCAAGTATTTTGACTCAACAACGTTTGAATGAGTTACAGATTCCGCTTTATACCACGATAG
ACAATGGTAGTATTCAGTTTATTCAGACGGAGGATCAGCAGATACAAATGCAATTTTACCGAGATCAGCAACGTTGGCTT
AATCGATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baylyi ADP1

48.519

100

0.49

  comA/comEC Acinetobacter baumannii D1279779

47.478

100

0.481

  comA/comEC Acinetobacter baumannii strain A118

46.863

100

0.475


Multiple sequence alignment