Detailed information NTG1090326

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: ABFT42_RS12890
• Genome accession: NZ_CP178596
• Coordinates: 2476478..2477095 (-)
• Length: 205 a.a.
• NCBI ID: WP_010335008.1
• Uniprot ID: -
• Organism: Bacillus mojavensis strain C3
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2471478..2482095

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABFT42_RS12860 (ABFT42_12860)	rpsT	2471772..2472038 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
ABFT42_RS12865 (ABFT42_12865)	holA	2472053..2473096 (-)	1044	WP_286058305.1	DNA polymerase III subunit delta	-
ABFT42_RS12870 (ABFT42_12870)	-	2473136..2473285 (-)	150	WP_003229985.1	hypothetical protein	-
ABFT42_RS12875 (ABFT42_12875)	-	2473326..2473460 (+)	135	WP_010335005.1	YqzM family protein	-
ABFT42_RS12880 (ABFT42_12880)	comEC	2473499..2475838 (-)	2340	WP_286059875.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ABFT42_RS12885 (ABFT42_12885)	-	2475842..2476411 (-)	570	WP_010335007.1	ComE operon protein 2	-
ABFT42_RS12890 (ABFT42_12890)	comEA	2476478..2477095 (-)	618	WP_010335008.1	helix-hairpin-helix domain-containing protein	Machinery gene
ABFT42_RS12895 (ABFT42_12895)	comER	2477179..2478000 (+)	822	WP_286058304.1	late competence protein ComER	-
ABFT42_RS12900 (ABFT42_12900)	-	2478065..2478808 (-)	744	WP_229146794.1	class I SAM-dependent DNA methyltransferase	-
ABFT42_RS12905 (ABFT42_12905)	rsfS	2478805..2479161 (-)	357	WP_010335011.1	ribosome silencing factor	-
ABFT42_RS12910 (ABFT42_12910)	yqeK	2479179..2479739 (-)	561	WP_286058303.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
ABFT42_RS12915 (ABFT42_12915)	-	2479729..2480298 (-)	570	WP_010335014.1	nicotinate-nucleotide adenylyltransferase	-
ABFT42_RS12920 (ABFT42_12920)	yhbY	2480309..2480599 (-)	291	WP_268504967.1	ribosome assembly RNA-binding protein YhbY	-
ABFT42_RS12925 (ABFT42_12925)	aroE	2480599..2481435 (-)	837	WP_268504966.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 22137.11 Da
• Isoelectric Point: 4.6750

>NTDB_id=1090326 ABFT42_RS12890 WP_010335008.1 2476478..2477095(-) (comEA) [Bacillus mojavensis strain C3]
MNWLNQHKMIIMSVAFAAVLIAVLCLFFFIGHNKEPVKQVISSEKDNAEVKQEVTKDKAEENIVIDIKGAVKHPGVYEMH
AGDRVSQAIEKAGGIGEKADETQVNLAELLQDGTVVYIPSEGEEEPQQAAGGAVQSSTGKEALVNINTATLEDLQNISGV
GPSKAEAIIAYREENGRFQAIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=1090326 ABFT42_RS12890 WP_010335008.1 2476478..2477095(-) (comEA) [Bacillus mojavensis strain C3]
TTGAATTGGTTGAATCAACATAAAATGATCATCATGTCAGTGGCCTTTGCTGCTGTTCTCATTGCGGTTCTTTGTCTCTT
TTTTTTCATCGGGCATAACAAAGAGCCTGTAAAACAAGTGATATCTAGTGAAAAGGATAATGCTGAGGTCAAGCAGGAAG
TGACAAAAGACAAAGCGGAAGAAAATATTGTAATTGACATAAAAGGTGCTGTTAAGCATCCCGGCGTTTATGAAATGCAT
GCAGGGGACAGAGTGTCGCAGGCTATTGAGAAAGCAGGCGGCATCGGCGAAAAAGCAGATGAAACGCAGGTGAATTTGGC
GGAACTTTTGCAGGACGGTACAGTGGTGTATATACCGAGTGAGGGAGAAGAGGAGCCGCAGCAAGCGGCCGGAGGTGCTG
TACAAAGCAGCACGGGGAAAGAGGCCTTGGTCAATATCAATACAGCAACATTAGAGGATTTACAAAACATTTCAGGAGTA
GGGCCTTCAAAAGCCGAAGCGATTATTGCATATCGGGAAGAGAACGGGCGTTTCCAGGCAATTGAAGATATCACAAAGGT
TTCGGGAATTGGCGAAAAATCATTTGAAAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (64-119)

• Helix-hairpin-helix motif (HHH_3) (141-203)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	74.272	100	0.746
comEA	Staphylococcus aureus MW2	38.182	100	0.41
comEA	Staphylococcus aureus N315	37.387	100	0.405