Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | ABFT42_RS02160 | Genome accession | NZ_CP178596 |
| Coordinates | 425034..426182 (+) | Length | 382 a.a. |
| NCBI ID | WP_168746930.1 | Uniprot ID | - |
| Organism | Bacillus mojavensis strain C3 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 420034..431182
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABFT42_RS02140 (ABFT42_02140) | - | 420410..421090 (-) | 681 | WP_268444286.1 | ABC transporter ATP-binding protein | - |
| ABFT42_RS02145 (ABFT42_02145) | - | 421106..422560 (-) | 1455 | WP_413286912.1 | ABC transporter permease | - |
| ABFT42_RS02150 (ABFT42_02150) | yclJ | 422771..423454 (+) | 684 | WP_010333020.1 | two-component system response regulator YclJ | - |
| ABFT42_RS02155 (ABFT42_02155) | - | 423441..424856 (+) | 1416 | WP_326217671.1 | HAMP domain-containing sensor histidine kinase | - |
| ABFT42_RS02160 (ABFT42_02160) | rapC | 425034..426182 (+) | 1149 | WP_168746930.1 | response regulator aspartate phosphatase RapC | Regulator |
| ABFT42_RS02165 (ABFT42_02165) | phrC | 426166..426288 (+) | 123 | WP_010333023.1 | PhrC/PhrF family phosphatase-inhibitory pheromone | Regulator |
| ABFT42_RS02170 (ABFT42_02170) | - | 426393..426485 (-) | 93 | WP_026014660.1 | YjcZ family sporulation protein | - |
| ABFT42_RS02175 (ABFT42_02175) | - | 426633..426737 (-) | 105 | WP_268444540.1 | sporulation protein YjcZ | - |
| ABFT42_RS02180 (ABFT42_02180) | - | 426857..428221 (-) | 1365 | WP_010333024.1 | aspartate kinase | - |
| ABFT42_RS02185 (ABFT42_02185) | ceuB | 428607..429557 (+) | 951 | WP_413286913.1 | petrobactin ABC transporter permease YclN | Machinery gene |
| ABFT42_RS02190 (ABFT42_02190) | yclO | 429550..430497 (+) | 948 | WP_010333026.1 | petrobactin ABC transporter permease YclO | - |
Sequence
Protein
Download Length: 382 a.a. Molecular weight: 45690.71 Da Isoelectric Point: 5.1409
>NTDB_id=1090283 ABFT42_RS02160 WP_168746930.1 425034..426182(+) (rapC) [Bacillus mojavensis strain C3]
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVSDHIERAEFYFKIAEAYYYMKQTYF
SLIHIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALEMAEAEQRAQLVGRAFYNLGLCYYNQDLLD
PAIDHFEKAVSTFENSRITNSLPQAYFLITLIYYKRGKHEKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQAQPNTEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFELSASYFLRVEEARKQIQRSEGLYEIEI
MKSGVIPSSAVGQKINEWYKYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVSDHIERAEFYFKIAEAYYYMKQTYF
SLIHIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALEMAEAEQRAQLVGRAFYNLGLCYYNQDLLD
PAIDHFEKAVSTFENSRITNSLPQAYFLITLIYYKRGKHEKASEYHKRGYEYAKETDDADYAVKFEFLQSLYQAQPNTEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFELSASYFLRVEEARKQIQRSEGLYEIEI
Nucleotide
Download Length: 1149 bp
>NTDB_id=1090283 ABFT42_RS02160 WP_168746930.1 425034..426182(+) (rapC) [Bacillus mojavensis strain C3]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGGACCTTCAGTGT
ACCGGATGCCGAGGTGCTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGACTCCAACTTGCTGTTATATT
ACTCACTAATGGAATTTCGCCACCAGCTTATGCTTGATTATCTCGAGCCGCTGGAGAAATTAAATATCGAAGACCAGCCG
AGCCTGTCTGAATTATCACGAAATATAGACAGCAACCAAGCTGACCTAAAAGGACTTCTTGATTACTATGTGAATTTCTT
CCGCGGAATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATATTACAAACAGGCGGAGAAAAAACTTTCTT
TTGTTTCCGATCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTACTTT
TCATTGATTCATATCAAGAATGCATATGAAATTTATGTAGAGCAGGAAACCTATAATGTTCGGATTATCCAATGCCATTT
CGTGTTCGGAGTTAACCTCATGGATGAGAGAAATTTCGAACAAGCCGCACGGCATTTTAAATTGGCGCTGGAGATGGCGG
AAGCGGAACAAAGAGCCCAATTGGTTGGAAGAGCATTTTATAATTTGGGGCTGTGTTATTACAATCAAGACCTTCTCGAC
CCTGCCATTGACCATTTTGAGAAAGCGGTTTCTACTTTTGAAAACAGCAGAATCACCAATTCTCTGCCTCAGGCATATTT
TTTAATAACACTTATTTATTATAAACGCGGAAAACATGAGAAGGCTTCGGAATATCACAAGAGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGATTACGCGGTAAAATTTGAGTTTTTACAATCCCTATATCAGGCACAGCCCAATACAGAAGGA
ATCGAACGATGTTTTCAATACTTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAAAAATGGTTTGAACTGTCTGCTTCCTACTTTCTTAGAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAAATATATCCGGACCTTCAGTGT
ACCGGATGCCGAGGTGCTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGACTCCAACTTGCTGTTATATT
ACTCACTAATGGAATTTCGCCACCAGCTTATGCTTGATTATCTCGAGCCGCTGGAGAAATTAAATATCGAAGACCAGCCG
AGCCTGTCTGAATTATCACGAAATATAGACAGCAACCAAGCTGACCTAAAAGGACTTCTTGATTACTATGTGAATTTCTT
CCGCGGAATGTATGAGTTTGATAAGCGGGAATTTATTTCTGCCATTACATATTACAAACAGGCGGAGAAAAAACTTTCTT
TTGTTTCCGATCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTACTTT
TCATTGATTCATATCAAGAATGCATATGAAATTTATGTAGAGCAGGAAACCTATAATGTTCGGATTATCCAATGCCATTT
CGTGTTCGGAGTTAACCTCATGGATGAGAGAAATTTCGAACAAGCCGCACGGCATTTTAAATTGGCGCTGGAGATGGCGG
AAGCGGAACAAAGAGCCCAATTGGTTGGAAGAGCATTTTATAATTTGGGGCTGTGTTATTACAATCAAGACCTTCTCGAC
CCTGCCATTGACCATTTTGAGAAAGCGGTTTCTACTTTTGAAAACAGCAGAATCACCAATTCTCTGCCTCAGGCATATTT
TTTAATAACACTTATTTATTATAAACGCGGAAAACATGAGAAGGCTTCGGAATATCACAAGAGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGATTACGCGGTAAAATTTGAGTTTTTACAATCCCTATATCAGGCACAGCCCAATACAGAAGGA
ATCGAACGATGTTTTCAATACTTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAAAAATGGTTTGAACTGTCTGCTTCCTACTTTCTTAGAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
95.55 |
100 |
0.956 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
56.579 |
99.476 |
0.563 |