Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | ABFT42_RS00575 | Genome accession | NZ_CP178596 |
| Coordinates | 103252..105684 (+) | Length | 810 a.a. |
| NCBI ID | WP_413286828.1 | Uniprot ID | - |
| Organism | Bacillus mojavensis strain C3 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 98252..110684
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABFT42_RS00560 (ABFT42_00560) | ctsR | 101129..101593 (+) | 465 | WP_010332747.1 | transcriptional regulator CtsR | - |
| ABFT42_RS00565 (ABFT42_00565) | mcsA | 101607..102164 (+) | 558 | WP_010332748.1 | protein-arginine kinase activator protein McsA | - |
| ABFT42_RS00570 (ABFT42_00570) | - | 102164..103255 (+) | 1092 | WP_168746771.1 | protein arginine kinase | - |
| ABFT42_RS00575 (ABFT42_00575) | clpC | 103252..105684 (+) | 2433 | WP_413286828.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| ABFT42_RS00580 (ABFT42_00580) | radA | 105776..107152 (+) | 1377 | WP_413286829.1 | DNA repair protein RadA | Machinery gene |
| ABFT42_RS00585 (ABFT42_00585) | disA | 107156..108238 (+) | 1083 | WP_003242042.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| ABFT42_RS00590 (ABFT42_00590) | - | 108358..109458 (+) | 1101 | WP_168746772.1 | PIN/TRAM domain-containing protein | - |
| ABFT42_RS00595 (ABFT42_00595) | ispD | 109473..110171 (+) | 699 | WP_413286830.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| ABFT42_RS00600 (ABFT42_00600) | ispF | 110164..110640 (+) | 477 | WP_010332754.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90068.63 Da Isoelectric Point: 6.1841
>NTDB_id=1090278 ABFT42_RS00575 WP_413286828.1 103252..105684(+) (clpC) [Bacillus mojavensis strain C3]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVSVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLA
EIVSLMSDQLTKRLKEQELSIELTEAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGHHIVLDVEDGE
FVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVESLIGRGQEMSQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVSVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLA
EIVSLMSDQLTKRLKEQELSIELTEAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIHKGHHIVLDVEDGE
FVVKTTAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=1090278 ABFT42_RS00575 WP_413286828.1 103252..105684(+) (clpC) [Bacillus mojavensis strain C3]
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAGGTACTGGCGCTTGCACAGGAAGAAGCACTGCGTTTAGGTCATAA
CAATATCGGCACTGAACATATTTTATTAGGACTGGTGCGAGAAGGAGAGGGCATCGCTGCTAAAGCACTTCAAGCGCTTG
GTCTTGGTTCAGATAAAATTCAAAAAGAAGTTGAGAGCTTAATCGGGCGCGGACAGGAAATGTCTCAAACGATTCATTAT
ACTCCGAGAGCTAAAAAAGTCATTGAGTTATCAATGGATGAGGCCAGAAAACTCGGCCATTCTTATGTGGGTACAGAGCA
TATTCTTCTTGGTCTTATTCGCGAAGGTGAAGGTGTGGCTGCGAGAGTGCTTAACAATCTCGGAGTCAGCTTAAATAAAG
CAAGACAGCAAGTGCTTCAGCTTCTTGGAAGTAATGAAACAGGTTCTTCAGCGGCTGGAACAAACAGCAATGCGAATACG
CCAACACTAGATAGCCTGGCAAGAGATTTAACAGCGATTGCAAAGGAAGACAGCCTTGATCCGGTTATCGGCAGAAGCAA
AGAAATTCAGCGTGTTATTGAAGTGCTGAGCCGCAGAACGAAAAATAATCCTGTTCTGATTGGGGAACCGGGCGTAGGTA
AAACAGCTATCGCAGAAGGTCTCGCACAGCAGATTATTAATAATGAAGTTCCCGAAATTTTACGGGATAAACGCGTTATG
ACATTAGACATGGGAACAGTTGTTGCCGGTACGAAATATCGCGGTGAATTTGAGGACCGCTTGAAAAAAGTGATGGATGA
AATCCGTCAGGCAGGAAATATCATTCTATTCATTGATGAGCTCCATACACTAATCGGAGCGGGCGGAGCAGAAGGTGCCA
TTGATGCATCCAACATTTTGAAACCTTCACTTGCTCGCGGAGAACTTCAGTGCATTGGTGCGACAACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCTCTGGAACGCCGTTTTCAGCCAATCCAGGTTGATCAGCCGTCTGTAGACGAAAG
CATTCAAATCCTAAAAGGCTTGCGTGACCGATATGAAGCCCACCACCGCGTTTCTATCACTGACGAAGCCATTGAGGCTG
CGGTTAAGCTTTCTGACAGATATATCTCTGACCGTTTCCTTCCGGATAAAGCTATTGACTTGATCGATGAAGCGGGCTCA
AAGGTCAGATTGCGTTCATTTACAACGCCTCCTAATTTAAAAGAGCTTGAACAGAAACTTGATGAAGTTCGTAAAGAGAA
GGATGCTGCGGTGCAAAGCCAAGAATTTGAGAAAGCCGCTTCCTTGCGTGATACGGAACAGCGTTTGCGTGAACAGGTGG
AGGATACGAAAAAATCATGGAAAGAGAAGCAGGGGCAGGAAAACTCAGAGGTTTCTGTGGATGATATTGCGATGGTTGTA
TCCAGCTGGACTGGGGTGCCTGTTTCAAAAATCGCTCAAACTGAAACAGATAAGCTTCTTAATATGGAGAGCATTCTTCA
TTCCCGTGTCATCGGCCAAGATGAAGCTGTTGTAGCCGTTGCTAAAGCGGTCAGACGTGCGAGAGCAGGGCTAAAAGATC
CTAAACGTCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGCGTAGGTAAAACAGAGCTTGCACGGGCACTTGCTGAG
TCTATCTTCGGTGATGAAGAAGCCATGATTAGAATTGATATGTCTGAATACATGGAAAAACACTCGACTTCTAGACTTGT
AGGTTCACCTCCAGGGTATGTGGGTTACGATGAGGGCGGCCAATTAACAGAGAAGGTAAGAAGAAAACCATACTCTGTTG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGACGTCTTCAATATCCTCCTTCAAGTTCTTGAAGACGGACGATTAACT
GATTCTAAAGGCCGTACAGTCGATTTCCGCAACACGATTCTGATCATGACATCAAACGTCGGAGCAAGTGAGCTGAAACG
CAACAAATATGTCGGCTTCAACGTTCAGGATGAGACGCAAAATCATAAAGACATGAAGGATAAAGTGATGGGTGAGCTGA
AACGTGCGTTCAGACCGGAATTCATCAACCGAATTGATGAAATTATCGTCTTCCATTCACTCGAGAAAAAACATCTGGCT
GAAATCGTGTCATTGATGTCTGATCAATTAACGAAACGACTTAAAGAACAGGAGCTTTCTATAGAATTGACGGAAGCTGC
AAAAGCAAAAGTCGCGGAAGAGGGCGTAGACCTTGAATACGGTGCCCGCCCGCTCAGAAGAGCCATTCAAAAACATGTGG
AGGATCGTTTATCCGAAGAGCTCCTCAGGGGTAACATTCATAAAGGGCACCATATCGTTCTTGATGTAGAAGATGGCGAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAGGTACTGGCGCTTGCACAGGAAGAAGCACTGCGTTTAGGTCATAA
CAATATCGGCACTGAACATATTTTATTAGGACTGGTGCGAGAAGGAGAGGGCATCGCTGCTAAAGCACTTCAAGCGCTTG
GTCTTGGTTCAGATAAAATTCAAAAAGAAGTTGAGAGCTTAATCGGGCGCGGACAGGAAATGTCTCAAACGATTCATTAT
ACTCCGAGAGCTAAAAAAGTCATTGAGTTATCAATGGATGAGGCCAGAAAACTCGGCCATTCTTATGTGGGTACAGAGCA
TATTCTTCTTGGTCTTATTCGCGAAGGTGAAGGTGTGGCTGCGAGAGTGCTTAACAATCTCGGAGTCAGCTTAAATAAAG
CAAGACAGCAAGTGCTTCAGCTTCTTGGAAGTAATGAAACAGGTTCTTCAGCGGCTGGAACAAACAGCAATGCGAATACG
CCAACACTAGATAGCCTGGCAAGAGATTTAACAGCGATTGCAAAGGAAGACAGCCTTGATCCGGTTATCGGCAGAAGCAA
AGAAATTCAGCGTGTTATTGAAGTGCTGAGCCGCAGAACGAAAAATAATCCTGTTCTGATTGGGGAACCGGGCGTAGGTA
AAACAGCTATCGCAGAAGGTCTCGCACAGCAGATTATTAATAATGAAGTTCCCGAAATTTTACGGGATAAACGCGTTATG
ACATTAGACATGGGAACAGTTGTTGCCGGTACGAAATATCGCGGTGAATTTGAGGACCGCTTGAAAAAAGTGATGGATGA
AATCCGTCAGGCAGGAAATATCATTCTATTCATTGATGAGCTCCATACACTAATCGGAGCGGGCGGAGCAGAAGGTGCCA
TTGATGCATCCAACATTTTGAAACCTTCACTTGCTCGCGGAGAACTTCAGTGCATTGGTGCGACAACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCAGCTCTGGAACGCCGTTTTCAGCCAATCCAGGTTGATCAGCCGTCTGTAGACGAAAG
CATTCAAATCCTAAAAGGCTTGCGTGACCGATATGAAGCCCACCACCGCGTTTCTATCACTGACGAAGCCATTGAGGCTG
CGGTTAAGCTTTCTGACAGATATATCTCTGACCGTTTCCTTCCGGATAAAGCTATTGACTTGATCGATGAAGCGGGCTCA
AAGGTCAGATTGCGTTCATTTACAACGCCTCCTAATTTAAAAGAGCTTGAACAGAAACTTGATGAAGTTCGTAAAGAGAA
GGATGCTGCGGTGCAAAGCCAAGAATTTGAGAAAGCCGCTTCCTTGCGTGATACGGAACAGCGTTTGCGTGAACAGGTGG
AGGATACGAAAAAATCATGGAAAGAGAAGCAGGGGCAGGAAAACTCAGAGGTTTCTGTGGATGATATTGCGATGGTTGTA
TCCAGCTGGACTGGGGTGCCTGTTTCAAAAATCGCTCAAACTGAAACAGATAAGCTTCTTAATATGGAGAGCATTCTTCA
TTCCCGTGTCATCGGCCAAGATGAAGCTGTTGTAGCCGTTGCTAAAGCGGTCAGACGTGCGAGAGCAGGGCTAAAAGATC
CTAAACGTCCAATCGGCTCATTCATTTTCTTAGGCCCTACAGGCGTAGGTAAAACAGAGCTTGCACGGGCACTTGCTGAG
TCTATCTTCGGTGATGAAGAAGCCATGATTAGAATTGATATGTCTGAATACATGGAAAAACACTCGACTTCTAGACTTGT
AGGTTCACCTCCAGGGTATGTGGGTTACGATGAGGGCGGCCAATTAACAGAGAAGGTAAGAAGAAAACCATACTCTGTTG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGACGTCTTCAATATCCTCCTTCAAGTTCTTGAAGACGGACGATTAACT
GATTCTAAAGGCCGTACAGTCGATTTCCGCAACACGATTCTGATCATGACATCAAACGTCGGAGCAAGTGAGCTGAAACG
CAACAAATATGTCGGCTTCAACGTTCAGGATGAGACGCAAAATCATAAAGACATGAAGGATAAAGTGATGGGTGAGCTGA
AACGTGCGTTCAGACCGGAATTCATCAACCGAATTGATGAAATTATCGTCTTCCATTCACTCGAGAAAAAACATCTGGCT
GAAATCGTGTCATTGATGTCTGATCAATTAACGAAACGACTTAAAGAACAGGAGCTTTCTATAGAATTGACGGAAGCTGC
AAAAGCAAAAGTCGCGGAAGAGGGCGTAGACCTTGAATACGGTGCCCGCCCGCTCAGAAGAGCCATTCAAAAACATGTGG
AGGATCGTTTATCCGAAGAGCTCCTCAGGGGTAACATTCATAAAGGGCACCATATCGTTCTTGATGTAGAAGATGGCGAA
TTTGTCGTAAAAACGACTGCTAAAACGAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
98.765 |
100 |
0.988 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50.125 |
99.012 |
0.496 |
| clpC | Streptococcus thermophilus LMD-9 |
46.489 |
100 |
0.474 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.247 |
100 |
0.472 |
| clpC | Streptococcus pneumoniae Rx1 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus pneumoniae D39 |
45.365 |
99.877 |
0.453 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus mutans UA159 |
43.462 |
100 |
0.443 |
| clpE | Streptococcus mutans UA159 |
53.159 |
80.123 |
0.426 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.383 |
87.778 |
0.425 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.772 |
76.914 |
0.414 |
| clpE | Streptococcus pneumoniae Rx1 |
53.772 |
76.914 |
0.414 |
| clpE | Streptococcus pneumoniae D39 |
53.772 |
76.914 |
0.414 |
| clpE | Streptococcus pneumoniae R6 |
53.772 |
76.914 |
0.414 |