Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ACJGE3_RS09605 Genome accession   NZ_CP178562
Coordinates   1997152..1999434 (-) Length   760 a.a.
NCBI ID   WP_413353722.1    Uniprot ID   -
Organism   Bacillus velezensis strain JT-3     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 1992152..2004434
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJGE3_RS09565 (ACJGE3_09565) - 1992612..1993043 (+) 432 WP_077722765.1 Na(+)/H(+) antiporter subunit B -
  ACJGE3_RS09570 (ACJGE3_09570) - 1993043..1993384 (+) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  ACJGE3_RS09575 (ACJGE3_09575) - 1993377..1994858 (+) 1482 WP_369614388.1 Na+/H+ antiporter subunit D -
  ACJGE3_RS09580 (ACJGE3_09580) - 1994864..1995340 (+) 477 WP_071392239.1 Na+/H+ antiporter subunit E -
  ACJGE3_RS09585 (ACJGE3_09585) - 1995340..1995624 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  ACJGE3_RS09590 (ACJGE3_09590) mnhG 1995608..1995982 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  ACJGE3_RS09595 (ACJGE3_09595) - 1996022..1996405 (-) 384 WP_003152054.1 hotdog fold thioesterase -
  ACJGE3_RS09600 (ACJGE3_09600) comA 1996427..1997071 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  ACJGE3_RS09605 (ACJGE3_09605) comP 1997152..1999434 (-) 2283 WP_413353722.1 histidine kinase Regulator
  ACJGE3_RS09610 (ACJGE3_09610) comX 1999448..1999621 (-) 174 WP_102422026.1 competence pheromone ComX -
  ACJGE3_RS09615 (ACJGE3_09615) - 1999590..2000450 (-) 861 WP_180997900.1 polyprenyl synthetase family protein -
  ACJGE3_RS09620 (ACJGE3_09620) degQ 2000658..2000798 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  ACJGE3_RS09625 (ACJGE3_09625) - 2001263..2001604 (+) 342 WP_014305721.1 hypothetical protein -
  ACJGE3_RS09630 (ACJGE3_09630) - 2001611..2002831 (-) 1221 WP_003152038.1 EAL and HDOD domain-containing protein -
  ACJGE3_RS09635 (ACJGE3_09635) - 2002961..2004427 (-) 1467 WP_014305722.1 nicotinate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 760 a.a.        Molecular weight: 87594.80 Da        Isoelectric Point: 7.3982

>NTDB_id=1090175 ACJGE3_RS09605 WP_413353722.1 1997152..1999434(-) (comP) [Bacillus velezensis strain JT-3]
MKLSKNTYSILLILLSLSYIFYLTYINVNNLFVGATANVNNKNQIEITKVSDYTMAYYAGVKKGDIVIKINQNKSVEPKD
LKQNTLKNVRSMTVERSGEIVDLKNLSLLSEDNLFVYLIPVIFFFVCLSCIILILKINKEQDSVSAFILIIFLLTTGIAY
VSAGGSSKGDIISRYVNVITLISVPVNYLLFIYQYIKEFGYKIFNGKVFVALYTVPVINIILEFFRHCFERGVVGKVNLV
SISLLYLIALFFITIGLIKYKKTEQANILKTFLLINIFAFSPFVFLYVAPYIIFNDYYVSSFLVAPFLLLIPFSLVYQFM
TNKIYEIDFIIGRLKYYSLLAVTPTLLIITIYDLVQDPNSEFYTFKLTLLTYIIMLAVFYSKEILDFRFRLKRFSEKHNY
QDSIFKFTQIIKGASSLKQVFTELESTLLEVLMVSKVCVLEVEGDLNIRCFFNDNEKKLWEPYSHQLAETTSEIGKIVQV
DKGFLMKIGERGSKSYIVLCLSFMNTPKLTWDEISWLKTLSFYTSITMENVLKIEELMNHLEDLKKQETNPVWLKKLMFT
IEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDLGL
VKAVSKLAAQQQERAPFHIRLNTGRFTAALDLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGVGCNQEEGG
GQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2283 bp        

>NTDB_id=1090175 ACJGE3_RS09605 WP_413353722.1 1997152..1999434(-) (comP) [Bacillus velezensis strain JT-3]
ATGAAGTTATCTAAAAATACGTATTCCATTTTATTAATTTTACTCAGCTTGTCTTATATTTTCTATTTAACTTATATAAA
TGTAAATAATTTGTTTGTAGGAGCCACCGCAAATGTTAATAACAAGAATCAAATAGAGATTACCAAAGTATCAGATTACA
CAATGGCTTATTATGCTGGTGTTAAAAAAGGTGACATTGTAATAAAAATTAATCAGAATAAGAGCGTTGAACCAAAAGAT
TTAAAACAAAATACATTGAAAAACGTTAGATCTATGACAGTTGAAAGATCTGGTGAAATAGTTGATCTCAAAAATTTAAG
TTTATTAAGTGAAGACAACTTATTTGTTTATTTAATACCTGTTATTTTTTTCTTTGTATGCCTTAGTTGTATTATCCTTA
TTTTAAAAATTAATAAGGAGCAAGATTCAGTTTCAGCTTTTATATTGATCATCTTTTTACTCACTACTGGTATAGCATAT
GTAAGTGCGGGAGGTTCATCAAAAGGAGATATAATAAGCCGATACGTAAATGTCATAACTTTAATATCCGTACCGGTAAA
TTATCTCTTGTTTATTTATCAATATATCAAAGAATTTGGATACAAGATTTTTAACGGGAAAGTTTTTGTTGCTTTATATA
CAGTCCCTGTTATTAATATAATACTAGAGTTTTTTAGGCATTGCTTTGAAAGAGGAGTAGTGGGGAAAGTTAATTTAGTA
TCAATATCTCTCCTTTATTTAATAGCTTTATTTTTCATTACCATAGGTTTAATAAAGTACAAAAAAACAGAGCAAGCAAA
TATTCTTAAGACTTTTCTTTTAATTAATATTTTTGCTTTCTCACCATTTGTATTCTTGTATGTGGCACCCTACATCATTT
TTAATGACTATTATGTTTCTTCTTTTTTAGTTGCGCCTTTTCTTTTATTAATTCCTTTTTCTTTAGTTTATCAATTTATG
ACTAATAAAATCTATGAAATTGATTTTATTATTGGGCGGTTGAAATATTATAGTCTTTTAGCTGTCACTCCTACTTTACT
TATTATTACAATTTATGATCTTGTACAAGATCCAAACTCAGAGTTTTATACGTTTAAACTAACTTTGCTGACATATATTA
TTATGTTGGCTGTGTTTTATTCAAAAGAGATCTTAGATTTTCGTTTCCGTTTAAAGCGTTTTTCTGAAAAACATAATTAT
CAGGATAGCATATTCAAGTTTACTCAAATAATTAAAGGAGCTTCATCCTTAAAACAAGTATTCACTGAACTTGAATCTAC
TCTACTTGAAGTTTTGATGGTTAGTAAAGTATGTGTTTTAGAAGTAGAAGGAGACTTAAATATAAGGTGTTTTTTTAATG
ATAATGAGAAAAAATTATGGGAGCCGTATTCTCATCAATTAGCTGAAACGACAAGCGAAATTGGCAAAATAGTTCAGGTG
GATAAAGGGTTTTTAATGAAAATAGGGGAACGGGGCAGTAAATCATACATTGTACTGTGTTTATCATTTATGAATACTCC
GAAACTAACCTGGGATGAGATTTCTTGGTTAAAAACTTTATCATTCTACACCAGTATTACGATGGAGAATGTGCTTAAAA
TCGAAGAACTTATGAATCATCTCGAAGATTTAAAGAAACAGGAGACAAACCCGGTCTGGCTCAAAAAGCTGATGTTTACG
ATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTCCATGATTCGGTGCTGCAGGATTTGATTTCTTTGAAGCGCCA
GTGTGAGCTGTTTCTGGCCGATTTTAAGAAAGAAGAGCCTTGCCACATAGAGGTGCAGGACAAGCTTCATCAGATGAATG
AGCAGATGTCGGATGTTATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTGGGTCTG
GTCAAGGCGGTATCCAAGCTTGCCGCGCAACAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCGGTTTAC
GGCGGCGCTGGATTTGTACCGCATTATTCAGGAATTTCTTTCGAACGCCATGAAGCATTCACAGGCGAATGAGGTGCTGA
TTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTCGGCTGCAATCAGGAAGAAGGCGGC
GGACAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAACGTGTCCGTGCGCTTGACGGACGGATGAAAATCGACACAAG
TGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains


Predicted by InterproScan.

(566-635)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

55.875

100

0.563


Multiple sequence alignment