Detailed information NTG1089702

Bioinformatically predicted

Overview

• Name: pilA/pilA1
• Type: Machinery gene
• Locus tag: ACLWNE_RS04445
• Genome accession: NZ_CP178485
• Coordinates: 841674..842144 (-)
• Length: 156 a.a.
• NCBI ID: WP_339956365.1
• Uniprot ID: -
• Organism: Thermus oshimai strain Blanco
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 836674..847144

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLWNE_RS04415 (ACLWNE_04415)	-	837194..837541 (-)	348	WP_413217564.1	type II secretion system protein	-
ACLWNE_RS04420 (ACLWNE_04420)	-	837618..837974 (-)	357	WP_413217565.1	type II secretion system protein	-
ACLWNE_RS04425 (ACLWNE_04425)	comZ	838209..839897 (-)	1689	WP_413217566.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
ACLWNE_RS04430 (ACLWNE_04430)	pilA/pilA3	839906..840598 (-)	693	WP_339956364.1	PilW family protein	Machinery gene
ACLWNE_RS04435 (ACLWNE_04435)	pilA/pilA2	840595..841155 (-)	561	WP_016329467.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	Machinery gene
ACLWNE_RS04440 (ACLWNE_04440)	-	841152..841619 (-)	468	WP_016329466.1	GspH/FimT family protein	-
ACLWNE_RS04445 (ACLWNE_04445)	pilA/pilA1	841674..842144 (-)	471	WP_339956365.1	GspH/FimT family protein	Machinery gene
ACLWNE_RS04450 (ACLWNE_04450)	-	842141..842515 (-)	375	WP_339956366.1	DUF1640 domain-containing protein	-
ACLWNE_RS04455 (ACLWNE_04455)	-	842512..843270 (-)	759	WP_339956367.1	TerC family protein	-
ACLWNE_RS04460 (ACLWNE_04460)	-	843295..844281 (+)	987	WP_339956368.1	YpdA family putative bacillithiol disulfide reductase	-
ACLWNE_RS04465 (ACLWNE_04465)	ilvB	844427..846115 (+)	1689	WP_339956369.1	biosynthetic-type acetolactate synthase large subunit	-
ACLWNE_RS04470 (ACLWNE_04470)	ilvN	846112..846624 (+)	513	WP_016329460.1	acetolactate synthase small subunit	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 16656.27 Da
• Isoelectric Point: 9.8795

>NTDB_id=1089702 ACLWNE_RS04445 WP_339956365.1 841674..842144(-) (pilA/pilA1) [Thermus oshimai strain Blanco]
MRGFSLLELLLVLSILGIVLALGLPRLNPDAQAVNQAARGLAEQVVRARLEAIRQNAPAGLAVFTEGAGGYAVFLDQNEN
RAYDPGEEIQAVRFGEGPWARVRLLEEASALGNLPLLFDARGVPAKPIAATIALADPGRRQVRKVVVSQAGRARLE

Nucleotide

• Length: 471 bp

>NTDB_id=1089702 ACLWNE_RS04445 WP_339956365.1 841674..842144(-) (pilA/pilA1) [Thermus oshimai strain Blanco]
GTGAGGGGATTTTCCCTGCTGGAGCTTCTCCTGGTGCTCTCCATCCTGGGGATCGTCCTGGCCCTGGGCCTCCCCCGCCT
GAACCCCGACGCCCAGGCGGTGAACCAGGCCGCCCGGGGCCTCGCGGAACAGGTGGTCCGCGCCCGCCTCGAGGCCATCC
GCCAGAACGCCCCCGCGGGGCTTGCGGTCTTCACCGAAGGCGCCGGAGGCTACGCGGTCTTCCTGGACCAAAACGAAAAC
CGGGCCTACGACCCCGGGGAAGAGATCCAGGCGGTGCGCTTTGGGGAAGGTCCCTGGGCCCGGGTGCGGCTCCTAGAGGA
AGCGAGCGCCCTGGGCAACCTCCCCCTCCTCTTTGACGCCCGGGGGGTGCCGGCCAAGCCCATCGCCGCCACCATCGCCC
TGGCCGACCCCGGAAGGCGGCAGGTGCGGAAGGTGGTGGTGAGCCAGGCGGGGCGGGCCCGGCTGGAGTGA

Domains

Predicted by InterproScan.

• Type II transport protein GspH (GspH) (37-151)

• Prokaryotic N-terminal methylation motif (N_methyl) (2-22)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA/pilA1	Thermus thermophilus HB27	67.442	82.692	0.558