Detailed information NTG1089248

Bioinformatically predicted

Overview

• Name: pilS
• Type: Regulator
• Locus tag: ACL0K2_RS17325
• Genome accession: NZ_CP178378
• Coordinates: 3774645..3776237 (-)
• Length: 530 a.a.
• NCBI ID: WP_045160765.1
• Uniprot ID: A0A0D9ARA6
• Organism: Pseudomonas sp. YJ42
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3769645..3781237

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACL0K2_RS17310 (ACL0K2_17310)	-	3770272..3771885 (-)	1614	WP_045160762.1	response regulator	-
ACL0K2_RS17315 (ACL0K2_17315)	-	3772100..3773155 (+)	1056	WP_045160763.1	DUF2333 family protein	-
ACL0K2_RS17320 (ACL0K2_17320)	pilR	3773194..3774534 (-)	1341	WP_045160764.1	sigma-54-dependent transcriptional regulator	Regulator
ACL0K2_RS17325 (ACL0K2_17325)	pilS	3774645..3776237 (-)	1593	WP_045160765.1	sensor histidine kinase	Regulator
ACL0K2_RS17330 (ACL0K2_17330)	-	3776227..3776463 (-)	237	WP_045160766.1	PP0621 family protein	-
ACL0K2_RS17335 (ACL0K2_17335)	-	3776561..3777562 (-)	1002	WP_045160767.1	outer membrane protein assembly factor BamD	-
ACL0K2_RS17340 (ACL0K2_17340)	rluD	3777846..3778820 (+)	975	WP_045160768.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
ACL0K2_RS17345 (ACL0K2_17345)	pgeF	3778817..3779551 (+)	735	WP_045160769.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 530 a.a.
• Molecular weight: 59015.15 Da
• Isoelectric Point: 8.1615

>NTDB_id=1089248 ACL0K2_RS17325 WP_045160765.1 3774645..3776237(-) (pilS) [Pseudomonas sp. YJ42]
MGTERLTFLGLQGRRILRLYHLYRVAIGLVLVLLISSDLHNDLMRMINPAAFYHGAWLYLILNILIAVLLQNPKRELPVL
ALALLDVTLLAALFYFAGGTPSGIGNLLIVAVAIANILLHGRIGFFIAAVAATGLIYLTFYLSLSDTAASSQYVQAAALG
TLCFAAALLVQGLTRRLQVSETLARQRAEEVANLEALNAQILQRMRTGIIVLDPQERVLLANQGALELLGQQSLTGERLA
PRCPELIRALQQWRDNPTLRPRNFKATPDGATLQPSFAALQHGVKQDTLIFLEDTSQIAQKAQQLKLASLGRLTASIAHE
IRNPLGAISHAAQLLQESDALDAGDLRLTQIIQDHSRRMNLVIENVLQLSRRRQAEPQLLDLKYWVHRFASEFRESLPPD
QRIHVETRGSSLQTRMDPNQLIQVLTNLVQNGLRYSAQKNGQAQVWLQVFRDETSDLPVLEVLDDGPGVPSEQLQNIFEP
FFTTENKGTGLGLYISRELCESNQARLDYRERDEGGSCFRIVFAHPRKLS

Nucleotide

• Length: 1593 bp

>NTDB_id=1089248 ACL0K2_RS17325 WP_045160765.1 3774645..3776237(-) (pilS) [Pseudomonas sp. YJ42]
GTGGGAACTGAGCGCCTGACGTTTCTCGGCCTCCAGGGCCGGCGAATCCTTCGGCTCTACCATCTTTATCGCGTCGCGAT
CGGCCTCGTGCTGGTCCTGCTCATCAGTAGCGACCTGCACAACGACCTGATGCGCATGATCAACCCGGCGGCGTTTTACC
ACGGCGCCTGGCTCTATCTGATTCTCAACATCCTCATCGCCGTGCTGCTGCAGAACCCGAAGCGGGAGCTGCCGGTGCTG
GCGCTCGCGCTGCTGGACGTCACCCTGCTCGCGGCACTGTTCTATTTCGCCGGCGGCACACCCAGCGGGATCGGCAACCT
GCTGATTGTCGCAGTCGCCATCGCCAACATTCTGCTGCACGGGCGCATCGGCTTTTTCATCGCCGCGGTGGCCGCGACCG
GCCTCATCTACCTGACCTTCTACCTCAGCCTCAGCGACACCGCGGCCAGCAGTCAGTACGTCCAGGCCGCGGCGCTGGGC
ACGCTATGCTTTGCCGCCGCGCTGCTGGTGCAAGGCCTGACTCGACGGCTGCAGGTCAGCGAAACACTCGCCCGCCAACG
TGCCGAGGAAGTCGCCAATCTCGAAGCGCTGAATGCCCAGATCCTGCAGCGTATGCGCACAGGGATCATCGTGCTCGACC
CGCAGGAGCGCGTGCTGCTGGCCAACCAAGGCGCACTTGAGCTGCTCGGCCAGCAATCATTGACCGGCGAGCGCCTGGCC
CCTCGCTGCCCCGAGCTGATCAGAGCGCTTCAGCAATGGCGCGACAATCCAACCCTGCGCCCGCGCAACTTCAAGGCAAC
GCCGGACGGCGCCACGCTGCAACCAAGCTTCGCCGCGCTGCAGCATGGGGTAAAGCAGGACACCCTGATTTTTCTTGAAG
ACACCTCGCAAATCGCGCAGAAGGCCCAGCAGCTCAAGCTCGCCTCGCTCGGCCGACTAACCGCCAGCATCGCCCACGAG
ATCCGCAATCCGCTCGGCGCAATCAGTCATGCGGCGCAGCTGCTACAGGAATCCGACGCGCTGGATGCAGGCGATTTGCG
TCTGACGCAAATCATTCAGGATCATTCTCGACGCATGAATCTGGTCATCGAGAACGTGCTTCAGCTGTCACGCCGCCGGC
AAGCCGAACCGCAGTTGCTGGACCTAAAGTATTGGGTACACCGGTTCGCCAGCGAATTTCGCGAGTCGCTGCCGCCTGAC
CAGCGCATACACGTGGAAACCCGCGGCAGCTCGCTGCAGACTCGCATGGATCCGAACCAGCTGATCCAGGTGCTGACCAA
CCTGGTGCAGAACGGCCTGCGCTACAGCGCTCAGAAAAATGGCCAGGCGCAGGTATGGCTGCAGGTATTCCGCGATGAGA
CCAGCGATTTGCCGGTGCTCGAAGTCCTCGACGACGGGCCCGGTGTGCCGTCCGAGCAACTGCAGAATATCTTCGAGCCC
TTCTTCACGACAGAGAACAAGGGCACGGGCCTGGGGCTCTATATTTCACGAGAACTCTGTGAAAGCAATCAAGCACGCCT
GGACTATCGTGAACGAGATGAGGGTGGCAGCTGTTTTCGCATCGTTTTCGCGCATCCGCGTAAGCTGAGCTGA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (309-373)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (417-523)

• PAS domain (PAS_8) (201-253)

3D structure

• AlphaFold DB: A0A0D9ARA6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilS	Pseudomonas aeruginosa PAK	65.472	100	0.655