Detailed information NTG1089182

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACLNGX_RS16980
• Genome accession: NZ_CP178374
• Coordinates: 3481252..3482415 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain 2023
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3476252..3487415

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLNGX_RS16950 (ACLNGX_16950)	-	3476517..3476936 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
ACLNGX_RS16955 (ACLNGX_16955)	comFC	3477010..3477699 (-)	690	WP_204530637.1	phosphoribosyltransferase family protein	Machinery gene
ACLNGX_RS16960 (ACLNGX_16960)	-	3477705..3477989 (-)	285	WP_017418816.1	late competence development ComFB family protein	-
ACLNGX_RS16965 (ACLNGX_16965)	comFA	3478047..3479432 (-)	1386	WP_317461593.1	DEAD/DEAH box helicase	Machinery gene
ACLNGX_RS16970 (ACLNGX_16970)	-	3479540..3480388 (-)	849	WP_003151387.1	DegV family protein	-
ACLNGX_RS16975 (ACLNGX_16975)	degU	3480486..3481175 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ACLNGX_RS16980 (ACLNGX_16980)	degS	3481252..3482415 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
ACLNGX_RS16985 (ACLNGX_16985)	-	3482638..3483285 (+)	648	WP_060657503.1	YigZ family protein	-
ACLNGX_RS16990 (ACLNGX_16990)	-	3483290..3484543 (+)	1254	WP_412838405.1	LCP family protein	-
ACLNGX_RS16995 (ACLNGX_16995)	-	3484633..3485709 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
ACLNGX_RS17000 (ACLNGX_17000)	tuaH	3485842..3487038 (-)	1197	WP_071392367.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=1089182 ACLNGX_RS16980 WP_003151385.1 3481252..3482415(-) (degS) [Bacillus velezensis strain 2023]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1089182 ACLNGX_RS16980 WP_003151385.1 3481252..3482415(-) (degS) [Bacillus velezensis strain 2023]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTCCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948