Detailed information NTG1088467

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: ACLD94_RS11385
• Genome accession: NZ_CP178220
• Coordinates: 2382267..2382704 (-)
• Length: 145 a.a.
• NCBI ID: WP_007612572.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain JN-Y2
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2377267..2387704

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLD94_RS11335 (ACLD94_11335)	sinI	2377650..2377823 (+)	174	WP_032874029.1	anti-repressor SinI	Regulator
ACLD94_RS11340 (ACLD94_11340)	sinR	2377857..2378192 (+)	336	WP_003153104.1	transcriptional regulator SinR	Regulator
ACLD94_RS11345 (ACLD94_11345)	tasA	2378240..2379025 (-)	786	WP_032874027.1	biofilm matrix protein TasA	-
ACLD94_RS11350 (ACLD94_11350)	sipW	2379090..2379674 (-)	585	WP_032874025.1	signal peptidase I SipW	-
ACLD94_RS11355 (ACLD94_11355)	tapA	2379646..2380317 (-)	672	WP_032874023.1	amyloid fiber anchoring/assembly protein TapA	-
ACLD94_RS11360 (ACLD94_11360)	-	2380576..2380905 (+)	330	WP_032874021.1	DUF3889 domain-containing protein	-
ACLD94_RS11365 (ACLD94_11365)	-	2380946..2381125 (-)	180	WP_022552966.1	YqzE family protein	-
ACLD94_RS11370 (ACLD94_11370)	comGG	2381182..2381559 (-)	378	WP_032874019.1	competence type IV pilus minor pilin ComGG	Machinery gene
ACLD94_RS11375 (ACLD94_11375)	comGF	2381560..2382060 (-)	501	WP_223204419.1	competence type IV pilus minor pilin ComGF	-
ACLD94_RS11380 (ACLD94_11380)	comGE	2381969..2382283 (-)	315	WP_032874016.1	competence type IV pilus minor pilin ComGE	Machinery gene
ACLD94_RS11385 (ACLD94_11385)	comGD	2382267..2382704 (-)	438	WP_007612572.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACLD94_RS11390 (ACLD94_11390)	comGC	2382694..2383002 (-)	309	WP_003153087.1	competence type IV pilus major pilin ComGC	Machinery gene
ACLD94_RS11395 (ACLD94_11395)	comGB	2383007..2384044 (-)	1038	WP_032874014.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACLD94_RS11400 (ACLD94_11400)	comGA	2384031..2385101 (-)	1071	WP_003153083.1	competence type IV pilus ATPase ComGA	Machinery gene
ACLD94_RS11405 (ACLD94_11405)	-	2385298..2386248 (-)	951	WP_032874012.1	magnesium transporter CorA family protein	-
ACLD94_RS11410 (ACLD94_11410)	-	2386394..2387695 (+)	1302	WP_032874010.1	hemolysin family protein	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16254.76 Da
• Isoelectric Point: 10.1850

>NTDB_id=1088467 ACLD94_RS11385 WP_007612572.1 2382267..2382704(-) (comGD) [Bacillus velezensis strain JN-Y2]
MNNNRRTENGFTLLESLIVLSLASVLLTVLFTTVPPVCTHLAVRQKTEQLQKDIQLAQETAIAEHKRTKITFLPKEHKYK
LQSGGRIVERSFDSLHITLVTLPESLEFNEKGHPNSGGKIQLKSAGFTYEITVYLGSGNVHAKRK

Nucleotide

• Length: 438 bp

>NTDB_id=1088467 ACLD94_RS11385 WP_007612572.1 2382267..2382704(-) (comGD) [Bacillus velezensis strain JN-Y2]
TTGAACAATAACAGGCGGACAGAAAATGGGTTTACCCTTCTTGAAAGCCTGATTGTGTTAAGCCTGGCGTCCGTCCTGCT
GACGGTTTTGTTCACGACGGTTCCGCCGGTCTGCACCCACCTTGCCGTGCGGCAAAAAACAGAACAGCTCCAAAAAGATA
TTCAGCTTGCTCAGGAAACGGCTATCGCAGAACATAAAAGAACAAAAATCACTTTTCTTCCAAAAGAGCATAAATACAAA
CTGCAGTCAGGCGGAAGGATTGTCGAGCGTTCTTTTGATTCGCTTCATATTACACTTGTAACTTTACCGGAGAGCCTTGA
ATTTAACGAAAAAGGCCATCCGAATTCGGGAGGAAAGATTCAATTGAAGAGCGCCGGGTTCACCTATGAGATAACAGTTT
ACTTAGGGAGCGGAAATGTCCATGCTAAACGGAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (5-31)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Bacillus subtilis subsp. subtilis str. 168	55.479	100	0.559