Detailed information NTG1088272

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACLII2_RS03000
• Genome accession: NZ_CP178213
• Coordinates: 570889..572046 (+)
• Length: 385 a.a.
• NCBI ID: WP_003227983.1
• Uniprot ID: A0A199WDV9
• Organism: Bacillus subtilis subsp. subtilis strain BM107
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 565889..577046

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLII2_RS02980	tuaH	566357..567550 (+)	1194	WP_003243252.1	teichuronic acid biosynthesis protein TuaH	-
ACLII2_RS02985	tagO	567695..568771 (+)	1077	WP_003227975.1	MraY family glycosyltransferase	-
ACLII2_RS02990	tagV	568844..570019 (-)	1176	WP_003244117.1	polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV	-
ACLII2_RS02995	yvyE	570019..570672 (-)	654	WP_003227979.1	YigZ family protein	-
ACLII2_RS03000	degS	570889..572046 (+)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator
ACLII2_RS03005	degU	572129..572818 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ACLII2_RS03010	fakBA	572916..573761 (+)	846	WP_003244125.1	DegV family protein	-
ACLII2_RS03015	comFA	573867..575258 (+)	1392	WP_003243962.1	ATP-dependent helicase ComFA	Machinery gene
ACLII2_RS03020	comFB	575318..575614 (+)	297	WP_003227989.1	late competence protein ComFB	-
ACLII2_RS03025	comFC	575578..576300 (+)	723	WP_003227991.1	comF operon protein ComFC	Machinery gene
ACLII2_RS03030	yvyF	576374..576793 (+)	420	WP_003227995.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44957.76 Da
• Isoelectric Point: 6.2957

>NTDB_id=1088272 ACLII2_RS03000 WP_003227983.1 570889..572046(+) (degS) [Bacillus subtilis subsp. subtilis strain BM107]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=1088272 ACLII2_RS03000 WP_003227983.1 570889..572046(+) (degS) [Bacillus subtilis subsp. subtilis strain BM107]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATTGAGCTTGGCGATAAACTTGAAGTGCAAACTCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTCCGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

3D structure

• AlphaFold DB: A0A199WDV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	100	100	1