Detailed information NTG1086279

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACI7Q4_RS24215
• Genome accession: NZ_CP177227
• Coordinates: 5210672..5212009 (+)
• Length: 445 a.a.
• NCBI ID: WP_003094694.1
• Uniprot ID: A0A0H2ZG94
• Organism: Pseudomonas aeruginosa strain FS26
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 5205672..5217009

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI7Q4_RS24190 (ACI7Q4_24190)	pgeF	5205815..5206543 (-)	729	WP_003102588.1	peptidoglycan editing factor PgeF	-
ACI7Q4_RS24195 (ACI7Q4_24195)	rluD	5206540..5207502 (-)	963	WP_003094686.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
ACI7Q4_RS24200 (ACI7Q4_24200)	-	5207648..5208673 (+)	1026	WP_003102590.1	outer membrane protein assembly factor BamD	-
ACI7Q4_RS24205 (ACI7Q4_24205)	-	5208830..5209075 (+)	246	WP_003102591.1	PP0621 family protein	-
ACI7Q4_RS24210 (ACI7Q4_24210)	pilS	5209065..5210657 (+)	1593	WP_003123394.1	two-component system sensor histidine kinase PilS	Regulator
ACI7Q4_RS24215 (ACI7Q4_24215)	pilR	5210672..5212009 (+)	1338	WP_003094694.1	two-component system response regulator PilR	Regulator
ACI7Q4_RS24220 (ACI7Q4_24220)	thiO	5212055..5213149 (-)	1095	WP_023518092.1	glycine oxidase ThiO	-
ACI7Q4_RS24225 (ACI7Q4_24225)	-	5213284..5213793 (+)	510	WP_003161431.1	Tfp pilus assembly protein FimT/FimU	-
ACI7Q4_RS24230 (ACI7Q4_24230)	-	5213899..5214405 (+)	507	WP_003102598.1	Tfp pilus assembly protein FimT/FimU	-
ACI7Q4_RS24235 (ACI7Q4_24235)	pilV	5214396..5214953 (+)	558	WP_003119423.1	type 4a pilus minor pilin PilV	Machinery gene
ACI7Q4_RS24240 (ACI7Q4_24240)	pilW	5214950..5215774 (+)	825	WP_003119422.1	type 4a pilus minor pilin PilW	-
ACI7Q4_RS24245 (ACI7Q4_24245)	pilX	5215771..5216358 (+)	588	WP_015648054.1	type 4a pilus minor pilin PilX	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49737.06 Da
• Isoelectric Point: 5.8654

>NTDB_id=1086279 ACI7Q4_RS24215 WP_003094694.1 5210672..5212009(+) (pilR) [Pseudomonas aeruginosa strain FS26]
MSRQKALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARELLAREPFDLCLTDMRLPDGSGLDLVQYIQQRHPQTPVAM
ITAYGSLDTAIQALKAGAFDFLTKPVDLGRLRELVATALRLRNPEAEEAPVDNRLLGESPPMRALRNQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRIERPFVPVNCGAIPSELMESEFFGHKKGSFTGAIEDKQGLFQAASGGTLFLDEVADLP
MAMQVKLLRAIQEKAVRAVGGQQEVAVDVRILCATHKDLAAEVGAGRFRQDLYYRLNVIELRVPPLRERREDIPLLAERI
LKRLAGDTGLPAARLTGDAQEKLKNYRFPGNVRELENMLERAYTLCEDDQIQPHDLRLADAPGASQEGAASLSEIDNLED
YLEDIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID

Nucleotide

• Length: 1338 bp

>NTDB_id=1086279 ACI7Q4_RS24215 WP_003094694.1 5210672..5212009(+) (pilR) [Pseudomonas aeruginosa strain FS26]
ATGAGCCGACAAAAAGCCCTGATCGTCGACGATGAACCGGATATCCGCGAACTGCTGGAAATCACTCTCGGCCGCATGAA
GCTGGACACCCGCAGCGCCCGCAACGTCAAGGAAGCCCGCGAGTTGCTGGCCCGCGAGCCGTTCGACCTGTGCCTCACCG
ACATGCGCCTGCCGGACGGCAGCGGCCTCGATCTGGTCCAGTACATCCAGCAGCGCCATCCACAGACCCCGGTGGCCATG
ATCACCGCGTACGGCAGCCTGGACACCGCGATCCAGGCGCTCAAGGCCGGTGCCTTCGACTTCCTCACCAAACCGGTCGA
CCTCGGTCGCTTGCGGGAGCTGGTGGCAACCGCCCTGCGCTTGCGCAACCCGGAAGCCGAGGAAGCGCCGGTGGACAACC
GCCTGCTCGGCGAGTCGCCGCCGATGCGCGCCCTGCGCAACCAGATCGGCAAGCTGGCGCGCAGCCAGGCGCCGGTCTAC
ATCAGTGGCGAGTCCGGTAGCGGCAAGGAGCTGGTGGCGCGCCTGATCCACGAGCAGGGGCCACGTATCGAGCGGCCGTT
CGTGCCGGTGAACTGCGGCGCGATTCCCTCCGAACTGATGGAAAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCACTG
GCGCTATCGAAGACAAGCAGGGCCTGTTCCAGGCCGCCAGCGGCGGCACCCTGTTCCTCGACGAAGTCGCCGACCTGCCG
ATGGCCATGCAGGTCAAACTGCTCCGGGCGATCCAGGAAAAGGCCGTGCGCGCGGTCGGCGGCCAGCAGGAGGTCGCCGT
CGACGTGCGCATCCTCTGCGCCACCCACAAGGACCTCGCCGCCGAAGTCGGCGCCGGGCGCTTCCGCCAGGACCTCTACT
ACCGCCTCAACGTCATCGAGCTGCGCGTACCGCCGCTGCGCGAACGCCGCGAGGACATCCCGCTGCTCGCCGAACGCATC
CTCAAGCGCCTGGCCGGCGACACCGGCCTGCCGGCCGCCAGGCTGACCGGCGACGCACAGGAGAAGCTGAAGAACTACCG
CTTCCCGGGCAACGTCCGCGAGCTGGAAAACATGCTGGAGCGCGCCTACACCCTGTGCGAAGACGACCAGATCCAGCCTC
ACGACCTGCGCCTGGCCGATGCGCCGGGTGCCAGCCAGGAAGGCGCCGCGAGCCTGAGCGAAATAGACAACCTCGAGGAC
TACCTGGAAGACATCGAGCGCAAGCTGATCATGCAGGCGCTCGAGGAGACCCGCTGGAACCGCACCGCCGCGGCCCAGCG
CCTGGGCCTGACGTTCCGCTCGATGCGCTACCGCCTGAAAAAGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-115)

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

3D structure

• AlphaFold DB: A0A0H2ZG94

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	100	100	1
pilR	Acinetobacter baumannii strain A118	51.198	100	0.528
luxO	Vibrio cholerae strain A1552	38.17	100	0.384