Detailed information    

insolico Bioinformatically predicted

Overview


Name   amiE   Type   Regulator
Locus tag   ACJWMC_RS07440 Genome accession   NZ_CP177181
Coordinates   1614336..1615421 (-) Length   361 a.a.
NCBI ID   WP_002891435.1    Uniprot ID   J7SHP8
Organism   Streptococcus salivarius strain MRD1919     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1609336..1620421
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJWMC_RS07410 - 1609699..1610517 (-) 819 WP_002891428.1 Cof-type HAD-IIB family hydrolase -
  ACJWMC_RS07415 - 1610510..1611304 (-) 795 WP_002891429.1 HAD-IIB family hydrolase -
  ACJWMC_RS07420 - 1611486..1611863 (+) 378 WP_002891430.1 GntR family transcriptional regulator -
  ACJWMC_RS07425 - 1611868..1612566 (+) 699 WP_002891431.1 ABC transporter ATP-binding protein -
  ACJWMC_RS07430 - 1612578..1613363 (+) 786 WP_037598283.1 hypothetical protein -
  ACJWMC_RS07435 amiF 1613414..1614343 (-) 930 WP_037598289.1 ATP-binding cassette domain-containing protein Regulator
  ACJWMC_RS07440 amiE 1614336..1615421 (-) 1086 WP_002891435.1 ABC transporter ATP-binding protein Regulator
  ACJWMC_RS07445 amiD 1615431..1616357 (-) 927 WP_002891436.1 oligopeptide ABC transporter permease OppC Regulator
  ACJWMC_RS07450 amiC 1616357..1617850 (-) 1494 WP_002891437.1 ABC transporter permease Regulator
  ACJWMC_RS07455 amiA3 1617911..1619881 (-) 1971 WP_037598293.1 peptide ABC transporter substrate-binding protein Regulator

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39890.55 Da        Isoelectric Point: 4.6519

>NTDB_id=1085951 ACJWMC_RS07440 WP_002891435.1 1614336..1615421(-) (amiE) [Streptococcus salivarius strain MRD1919]
MTENKNVILSARDIVVEFDVRDRVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTGMLEENGRVASGSIDYRGQDL
TKLKSHQDWASIRGAKIATIFQDPMTSLDPIKTIGSQIVEVIVKHQGKSAKEAKKMAIDYMDKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACHPDVLICDEPTTALDVTIQAQIIDLLKSLKEEYGFSVIFITHDLGVVASIADKVAVMYAGEIIE
YATVEEIFYEPCHPYTWSLLSSLPQLADDKGELFSIPGTPPSLYTPVVGDAFALRSDYAMQIDFEEKAPQFQVSDTHWAK
TWLLHEDAPKVEKPAVIQNLHEKIRANMGFAHLGDEEEGNA

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=1085951 ACJWMC_RS07440 WP_002891435.1 1614336..1615421(-) (amiE) [Streptococcus salivarius strain MRD1919]
ATGACAGAAAATAAAAATGTAATATTATCGGCTCGCGATATCGTCGTGGAATTTGACGTTCGTGACCGTGTTTTGACAGC
CATTCGAGGAGTTTCCCTTGATTTGGTTGAAGGTGAAGTTTTAGCCTTGGTTGGTGAGTCTGGTTCAGGTAAATCAGTTT
TGACTAAGACTTTCACAGGGATGCTTGAAGAAAATGGTCGTGTCGCTAGTGGTTCGATTGATTATCGCGGTCAAGATTTG
ACTAAGCTTAAGAGTCACCAAGATTGGGCATCTATTCGTGGGGCTAAGATTGCGACTATCTTCCAAGATCCTATGACCAG
CCTTGACCCAATTAAGACTATCGGTAGCCAAATTGTTGAAGTCATTGTCAAACACCAAGGAAAATCAGCCAAAGAAGCTA
AAAAAATGGCCATTGATTACATGGACAAGGTTGGTATTCCTGATGCTGAAAAACGTTTCAATGAGTATCCTTTCCAATAC
TCTGGTGGGATGCGTCAACGTATCGTTATTGCCATTGCCTTGGCTTGTCATCCGGATGTCCTTATCTGTGACGAACCAAC
AACTGCCCTCGATGTGACCATTCAAGCTCAAATCATCGATCTCTTGAAATCACTCAAAGAGGAGTACGGTTTCTCAGTGA
TTTTCATTACCCATGACCTTGGTGTGGTAGCAAGTATCGCTGATAAGGTTGCTGTTATGTATGCTGGTGAAATCATTGAA
TACGCAACTGTTGAGGAAATCTTCTATGAGCCTTGTCATCCATACACGTGGAGCTTGCTTTCAAGCTTGCCACAGTTGGC
TGATGATAAGGGTGAGCTTTTCTCAATTCCAGGGACACCACCATCACTTTATACACCGGTTGTTGGGGATGCCTTTGCCT
TGCGTTCAGACTACGCTATGCAGATTGACTTCGAGGAAAAAGCACCACAATTCCAAGTTTCAGATACTCACTGGGCTAAG
ACCTGGCTCTTACATGAGGATGCACCAAAAGTTGAAAAACCTGCGGTTATCCAAAATCTACATGAAAAAATCCGTGCTAA
TATGGGATTTGCACATTTAGGAGATGAGGAGGAAGGCAATGCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB J7SHP8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

99.446

100

0.994

  amiE Streptococcus thermophilus LMG 18311

96.676

100

0.967

  amiE Streptococcus thermophilus LMD-9

96.676

100

0.967

  oppD Streptococcus mutans UA159

54.441

96.676

0.526


Multiple sequence alignment