Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   ACJVC4_RS03330 Genome accession   NZ_CP177179
Coordinates   653683..654684 (+) Length   333 a.a.
NCBI ID   WP_002890449.1    Uniprot ID   J7SIF5
Organism   Streptococcus salivarius strain MRD-NRLLH     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 648683..659684
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJVC4_RS03310 smpB 649800..650264 (+) 465 WP_002885905.1 SsrA-binding protein SmpB -
  ACJVC4_RS03315 - 650411..651817 (+) 1407 WP_002890445.1 Cof-type HAD-IIB family hydrolase -
  ACJVC4_RS03320 - 651819..652187 (+) 369 WP_002890446.1 S1 RNA-binding domain-containing protein -
  ACJVC4_RS03325 - 652286..653368 (-) 1083 WP_037597586.1 M24 family metallopeptidase -
  ACJVC4_RS03330 ccpA 653683..654684 (+) 1002 WP_002890449.1 catabolite control protein A Regulator
  ACJVC4_RS03335 - 654744..655811 (+) 1068 WP_002890450.1 MmcQ/YjbR family DNA-binding protein -
  ACJVC4_RS03340 - 655824..656939 (+) 1116 WP_002890452.1 glycerate kinase -
  ACJVC4_RS03345 - 656970..657425 (-) 456 WP_002890453.1 YueI family protein -
  ACJVC4_RS03350 eno 657631..658935 (+) 1305 WP_002886048.1 surface-displayed alpha-enolase -
  ACJVC4_RS03355 - 659085..659270 (-) 186 WP_002890454.1 hypothetical protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36646.55 Da        Isoelectric Point: 5.4827

>NTDB_id=1085796 ACJVC4_RS03330 WP_002890449.1 653683..654684(+) (ccpA) [Streptococcus salivarius strain MRD-NRLLH]
MNTDETITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFA
TLARGIDDIATMYKYNIVLASSDENDDHEVTVINSLFAKQVDGIIFMGYHLTEKIRAEFSRTRTPIVLAGTVDLEHQLPS
VNIDYKAAVEDSVTQLAKNNEKVAFVSGPLIDDINGKLRLAGYKAGLEKNNLRYNEGLVFEAKYSYKDGFDLAQRVLNSG
ATAAYVGEDELAAGLLNGLFAAGKSVPEDFEIITSNDSPITSYTRPNLSSINHPLYDLGAVSMRMLTKIMNKEELEEKDV
ILNHGLTLRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1085796 ACJVC4_RS03330 WP_002890449.1 653683..654684(+) (ccpA) [Streptococcus salivarius strain MRD-NRLLH]
ATGAATACTGATGAAACAATCACTATTTATGACGTTGCGCGTGAGGCAGGCGTTTCGATGGCGACTGTGTCTCGTGTGGT
AAATGGAAATAAAAATGTAAAAGAAAACACCCGAAAAAAAGTGCTTGAGGTCATTGATCGTTTGGATTATCGTCCAAATG
CGGTTGCACGTGGCTTGGCGAGTAAGAAAACCACTACTGTAGGAGTTGTCATCCCAAATATTGCTAATAGTTATTTTGCT
ACTTTAGCAAGGGGGATTGATGATATTGCAACGATGTACAAGTACAATATTGTTCTTGCATCTAGTGATGAAAATGACGA
TCACGAAGTTACCGTGATTAACTCTCTATTTGCCAAACAAGTAGATGGTATCATCTTCATGGGTTACCACTTGACGGAAA
AAATTCGTGCAGAATTTTCTCGTACCCGTACTCCGATTGTCCTAGCAGGAACAGTGGACCTCGAGCACCAATTACCGAGC
GTTAACATCGACTATAAAGCTGCCGTTGAGGATTCTGTAACACAACTTGCCAAGAATAATGAAAAGGTTGCCTTTGTATC
AGGACCACTAATTGATGATATTAATGGCAAGCTCCGTCTAGCTGGTTATAAGGCTGGACTTGAAAAGAATAATTTGCGTT
ACAATGAAGGTCTTGTCTTTGAAGCCAAATATAGCTATAAAGATGGCTTTGATTTAGCACAACGTGTTTTGAACTCTGGT
GCCACTGCTGCCTATGTTGGAGAAGATGAATTGGCTGCAGGTCTCTTGAATGGCCTCTTTGCTGCAGGTAAATCAGTTCC
AGAAGACTTCGAAATCATCACAAGCAATGACTCACCAATTACAAGCTACACACGTCCAAACCTTTCTAGTATTAATCATC
CTCTCTATGATTTAGGGGCAGTTAGCATGCGTATGTTGACTAAAATCATGAATAAGGAAGAGCTCGAAGAAAAAGATGTT
ATTCTTAACCACGGTCTTACCTTACGTCAGTCAACAAAATAA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(182-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB J7SIF5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.177

100

0.772
  ccpA Streptococcus pneumoniae D39

76.276

100

0.763
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.589

99.399

0.553

Multiple sequence alignment