Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   ACLHWE_RS01675 Genome accession   NZ_CP177124
Coordinates   365669..366955 (-) Length   428 a.a.
NCBI ID   WP_193990784.1    Uniprot ID   -
Organism   Vagococcus salmoninarum strain 2022-01     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 360669..371955
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACLHWE_RS01670 (ACLHWE_01670) - 363907..365622 (-) 1716 WP_193990786.1 proline--tRNA ligase -
  ACLHWE_RS01675 (ACLHWE_01675) eeP 365669..366955 (-) 1287 WP_193990784.1 RIP metalloprotease RseP Regulator
  ACLHWE_RS01680 (ACLHWE_01680) dxr 366952..368112 (-) 1161 WP_193990782.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  ACLHWE_RS01685 (ACLHWE_01685) - 368170..368976 (-) 807 WP_126781954.1 phosphatidate cytidylyltransferase -
  ACLHWE_RS01690 (ACLHWE_01690) - 368983..369801 (-) 819 WP_193990780.1 isoprenyl transferase -
  ACLHWE_RS01695 (ACLHWE_01695) frr 370014..370571 (-) 558 WP_126781958.1 ribosome recycling factor -
  ACLHWE_RS01700 (ACLHWE_01700) pyrH 370574..371296 (-) 723 WP_126781960.1 UMP kinase -

Sequence

Protein


Download         Length: 428 a.a.        Molecular weight: 47125.16 Da        Isoelectric Point: 6.5145

>NTDB_id=1085491 ACLHWE_RS01675 WP_193990784.1 365669..366955(-) (eeP) [Vagococcus salmoninarum strain 2022-01]
MKTILTFIFVFCVIVIVHELGHFLFAKWSGILVREFSIGMGPKLFAHQGKDGTTYTIRMLPIGGYVRMAGLGEEEVEINP
GQPLSLELDENQIVKRINTSSKVQLANSIPIEVTAFDLEKDLFIKGNIYGDERKEVTYQVDHDATIIESDGTEVRIAPLD
VQFQSAKLYKRMLTNFAGPMFNFLLTFVIFIVILFAQGGNRTADPSSTIGSLVPDSVAEKAGILPGDRVLEVNGQEIATF
EALTKKIQSSADQELKLLVQRGDKTETITLTPETQKTDDGKTQVVLGIYSSYKLEKLSFSGKLKAAVSQTITSAMAIFVA
LKGLLTGFSLNKLGGPVMIFQVSSQVAQQGFMVVLGFMATLSVNLGIMNLLPIPALDGGKLLLNLVEGVRRKPLSPESEG
KITIFGFAFMMILMVLVTWNDIMRFFFR

Nucleotide


Download         Length: 1287 bp        

>NTDB_id=1085491 ACLHWE_RS01675 WP_193990784.1 365669..366955(-) (eeP) [Vagococcus salmoninarum strain 2022-01]
ATGAAAACTATTTTAACTTTTATTTTTGTTTTTTGTGTGATCGTGATTGTTCACGAATTAGGGCACTTTCTATTTGCAAA
ATGGTCAGGGATCTTAGTGAGAGAATTTTCGATTGGGATGGGGCCAAAATTGTTCGCTCATCAAGGTAAAGATGGCACAA
CTTATACGATCCGTATGTTGCCAATTGGCGGTTATGTCCGGATGGCTGGCTTAGGAGAAGAGGAAGTTGAAATCAATCCA
GGCCAACCTTTGTCTTTAGAATTAGACGAAAACCAAATCGTTAAACGGATCAACACTAGTAGTAAAGTTCAGTTAGCCAA
TAGTATCCCAATTGAAGTGACAGCCTTTGATTTAGAAAAGGACTTGTTTATTAAAGGGAATATTTATGGCGATGAGCGGA
AAGAAGTGACTTACCAAGTCGATCATGATGCAACAATTATTGAAAGTGACGGCACTGAAGTTCGGATTGCTCCCTTAGAC
GTCCAGTTCCAATCGGCGAAACTATACAAGCGGATGCTGACAAACTTTGCCGGTCCAATGTTCAACTTTTTGTTAACATT
TGTCATTTTTATCGTCATCTTGTTTGCTCAAGGTGGAAATCGGACGGCAGATCCTAGTAGCACCATTGGCAGTTTAGTCC
CTGACAGCGTTGCTGAGAAAGCTGGGATTCTACCAGGCGATCGGGTATTAGAAGTTAACGGTCAAGAAATTGCCACATTT
GAGGCATTAACTAAAAAAATTCAAAGTTCGGCAGACCAAGAACTAAAGTTGTTAGTTCAACGTGGTGATAAAACTGAAAC
GATTACGTTAACACCAGAAACGCAAAAGACCGATGATGGCAAAACACAAGTTGTTTTAGGGATTTATTCTAGCTATAAGT
TAGAGAAATTGTCTTTTAGTGGTAAGTTAAAAGCAGCCGTAAGCCAAACAATCACTAGTGCTATGGCGATTTTTGTCGCT
TTAAAAGGCTTGTTAACGGGCTTTAGTTTAAACAAACTAGGTGGACCAGTGATGATTTTTCAAGTGTCTTCACAAGTTGC
ACAACAAGGCTTTATGGTTGTTTTAGGCTTTATGGCAACTTTAAGTGTCAACTTAGGAATTATGAATTTATTACCGATTC
CTGCTTTAGATGGCGGTAAGTTATTACTGAACTTAGTCGAAGGGGTTAGAAGAAAGCCTTTAAGTCCAGAAAGTGAAGGG
AAAATCACGATTTTTGGTTTCGCTTTTATGATGATTTTAATGGTTTTAGTTACTTGGAATGATATTATGCGTTTTTTCTT
TAGATAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-413)

PDZ domain (PDZ_6)

(209-261)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

47.806

100

0.484
  eeP Streptococcus thermophilus LMG 18311

47.806

100

0.484

Multiple sequence alignment