Detailed information NTG0108368

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: BSUB_RS15015
• Genome accession: NZ_CP008698
• Coordinates: 2808931..2809536 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis subsp. subtilis str. AG1839
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2803931..2814536

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSUB_RS14985 (BSUB_02953)	-	2804744..2805133 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
BSUB_RS14990 (BSUB_02954)	yajC	2805190..2805456 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
BSUB_RS14995 (BSUB_02955)	tgt	2805493..2806638 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
BSUB_RS15000 (BSUB_02956)	queA	2806665..2807693 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
BSUB_RS15005 (BSUB_02957)	yrzS	2807723..2807923 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
BSUB_RS15010 (BSUB_02958)	ruvB	2807916..2808920 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
BSUB_RS15015 (BSUB_02959)	ruvA	2808931..2809536 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
BSUB_RS15020 (BSUB_02960)	bofC	2809675..2810187 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
BSUB_RS15025 (BSUB_02961)	csbX	2810235..2811542 (-)	1308	WP_003246197.1	MFS transporter	-
BSUB_RS15030 (BSUB_02962)	iolG	2811613..2812638 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
BSUB_RS15035 (BSUB_02963)	yrzF	2812876..2813523 (+)	648	WP_003246159.1	phosphotransferase	-
BSUB_RS22925 (BSUB_02964)	-	2813569..2813691 (-)	123	WP_003229707.1	hypothetical protein	-
BSUB_RS22930 (BSUB_02965)	yrzH	2813776..2814066 (+)	291	WP_003246047.1	DUF5412 family protein	-
BSUB_RS15050 (BSUB_02966)	-	2814073..2814213 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=108368 BSUB_RS15015 WP_003229717.1 2808931..2809536(-) (ruvA) [Bacillus subtilis subsp. subtilis str. AG1839]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=108368 BSUB_RS15015 WP_003229717.1 2808931..2809536(-) (ruvA) [Bacillus subtilis subsp. subtilis str. AG1839]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408