Detailed information NTG1083216

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ACK8N4_RS10640
• Genome accession: NZ_CP176811
• Coordinates: 2258307..2260532 (+)
• Length: 741 a.a.
• NCBI ID: WP_411387851.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain DG-1
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2253307..2265532

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK8N4_RS10615 (ACK8N4_10615)	-	2253614..2254213 (-)	600	WP_058179040.1	PilZ domain-containing protein	-
ACK8N4_RS10620 (ACK8N4_10620)	-	2254316..2255566 (+)	1251	WP_003091170.1	lipoprotein-releasing ABC transporter permease subunit	-
ACK8N4_RS10625 (ACK8N4_10625)	lolD	2255559..2256242 (+)	684	WP_003091168.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
ACK8N4_RS10630 (ACK8N4_10630)	-	2256312..2257556 (+)	1245	WP_410039283.1	lipoprotein-releasing ABC transporter permease subunit	-
ACK8N4_RS10635 (ACK8N4_10635)	-	2257643..2258176 (-)	534	WP_003091165.1	DUF2062 domain-containing protein	-
ACK8N4_RS10640 (ACK8N4_10640)	comA	2258307..2260532 (+)	2226	WP_411387851.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACK8N4_RS10645 (ACK8N4_10645)	exbB	2260605..2261240 (+)	636	WP_003091163.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
ACK8N4_RS10650 (ACK8N4_10650)	-	2261237..2261677 (+)	441	WP_003091161.1	ExbD/TolR family protein	-
ACK8N4_RS10655 (ACK8N4_10655)	lpxK	2261677..2262675 (+)	999	WP_003091159.1	tetraacyldisaccharide 4'-kinase	-
ACK8N4_RS10660 (ACK8N4_10660)	-	2262713..2262898 (+)	186	WP_003091157.1	Trm112 family protein	-
ACK8N4_RS10665 (ACK8N4_10665)	kdsB	2262898..2263662 (+)	765	WP_411387852.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACK8N4_RS10670 (ACK8N4_10670)	-	2263662..2264126 (+)	465	WP_003091154.1	low molecular weight protein-tyrosine-phosphatase	-
ACK8N4_RS10675 (ACK8N4_10675)	murB	2264123..2265142 (+)	1020	WP_033968886.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 79868.47 Da
• Isoelectric Point: 10.3506

>NTDB_id=1083216 ACK8N4_RS10640 WP_411387851.1 2258307..2260532(+) (comA) [Pseudomonas aeruginosa strain DG-1]
MRLGLPALAAGLLALRFLAELPSLGWLLGMAAAGLLLLFGRLYWLGLFLLGFAWACGSAQVALDGRLAAELDGRTLWLEG
RVVDLPASGEGITRFRLEEVSGARGVLLPERLRLSWRGAPPLMGGERWRLAVTLKRPRGLVNAAGFDYEAWLLGQRVGAV
GTVKAGQRLQPASGLDAWRDAWRQRLLAVDAQGRGAALAALVLGDGSGLSAAEWRMFQDTGTVHLMVISGSHISLLAGML
YGLVAALHRLGCWPRRLPWLPCACALGLLGAWSYGLMAGFEVPVRRACLMVSLALVWRLRFRHLGLLTPLLGTLVLVLLV
EPLASLQAGFWLSFLAVALLLWLFAGRLGRWRWWAAWGRAQWGMALGLAMPLLALGLPLSLSGALANLLAVPWIELLVVP
PALAGSLLLWVPGLGEGLLRAAGVSLDLLFRALGLLAGLAEAWQPPAAAAWSVALGMLGALCWLAPAGLPLRALGAALLL
PALLPSSPPVEWGRAEVRVLDVGQGLAVLVRTREHALLYDSGARQGALDMGERVVVPVLRSLDLRRLDGLLLSHADSDHA
GGAPTVASRFPPGWLVSGEPARLPSPLFADSCDERSWSWDGVVFEQWAWAQAGDSNDRSCVLRVEADGEVLLLTGDMSRA
AEHAWLARQADPRVDWLLAPHHGSRSSSGVAFVLRTRPRHVLVSRGWRNAFGHPHGEVMERYARVAAQVHDTARDGALTF
LLGSRGGARRERDSAHFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=1083216 ACK8N4_RS10640 WP_411387851.1 2258307..2260532(+) (comA) [Pseudomonas aeruginosa strain DG-1]
ATGCGCCTGGGATTGCCAGCCCTCGCCGCGGGGCTGCTGGCCCTGCGCTTCCTGGCGGAATTGCCGTCGCTCGGCTGGCT
GCTGGGCATGGCCGCCGCCGGACTGTTGCTGCTGTTCGGCCGGCTGTACTGGCTGGGGTTGTTCCTGCTCGGGTTCGCCT
GGGCCTGCGGCTCGGCGCAAGTCGCCCTGGACGGACGCCTGGCCGCCGAGCTGGATGGTCGCACCCTTTGGCTGGAGGGG
CGTGTGGTCGATCTGCCGGCGAGCGGCGAGGGCATCACGCGCTTCCGGCTGGAGGAGGTCAGTGGCGCGCGGGGCGTGCT
TCTTCCCGAGCGTCTGCGCCTGAGCTGGCGTGGTGCGCCGCCGCTGATGGGCGGCGAACGCTGGCGCCTGGCGGTGACCC
TGAAACGCCCTCGCGGCCTGGTGAACGCGGCGGGTTTCGACTACGAAGCCTGGTTGTTGGGGCAGCGGGTCGGTGCCGTT
GGAACGGTGAAGGCGGGCCAGCGCCTGCAGCCGGCCAGTGGCCTGGATGCCTGGCGCGACGCCTGGCGCCAGCGCCTCCT
GGCGGTCGATGCGCAGGGGCGCGGCGCCGCCCTGGCGGCGCTGGTGCTGGGGGATGGCTCTGGATTGAGCGCGGCCGAGT
GGCGCATGTTCCAGGACACCGGCACCGTGCATCTGATGGTCATCTCCGGTTCGCATATCTCGTTGCTGGCGGGGATGCTC
TATGGCCTGGTGGCGGCCTTGCATCGCCTGGGCTGCTGGCCGCGGCGCCTGCCCTGGCTGCCCTGTGCCTGCGCCCTGGG
TTTGCTTGGTGCCTGGAGCTACGGGTTGATGGCGGGCTTCGAGGTCCCGGTGCGGCGTGCCTGCCTGATGGTCAGCCTGG
CGCTGGTCTGGCGCCTGCGTTTCCGCCACCTGGGCTTGCTGACCCCGCTGCTGGGAACGCTGGTGCTGGTCTTGCTGGTC
GAGCCGCTGGCCAGCCTGCAGGCGGGGTTCTGGCTGTCGTTCCTGGCGGTAGCCCTGCTGCTCTGGCTGTTCGCCGGGCG
CCTTGGGCGCTGGCGCTGGTGGGCGGCCTGGGGGCGTGCGCAGTGGGGGATGGCGCTGGGGCTGGCGATGCCGCTGCTGG
CGCTGGGCCTGCCGTTGAGCCTGAGCGGAGCGCTGGCCAACCTACTGGCGGTACCTTGGATCGAACTGCTGGTAGTGCCC
CCGGCCCTGGCGGGGAGCCTGCTGCTGTGGGTACCCGGGCTGGGCGAGGGGCTGCTTCGCGCCGCAGGCGTTTCGCTGGA
CCTGCTGTTTCGTGCGCTTGGCCTGCTGGCGGGCCTGGCCGAGGCCTGGCAGCCACCCGCCGCAGCGGCCTGGAGCGTAG
CGCTGGGCATGCTCGGCGCGCTCTGCTGGCTGGCGCCGGCTGGCTTGCCGTTGCGTGCCCTCGGTGCCGCGTTGCTACTG
CCGGCGTTGTTGCCGTCATCGCCGCCTGTCGAATGGGGGCGGGCGGAAGTGCGGGTGCTGGACGTCGGCCAGGGGCTGGC
CGTGCTGGTGCGTACCCGGGAGCATGCCTTGCTCTATGACAGCGGTGCGCGGCAGGGGGCGCTCGACATGGGCGAGCGGG
TGGTGGTGCCGGTGCTGCGCAGCCTGGACTTGCGACGCCTGGACGGCCTGTTGCTGAGCCATGCCGACAGCGACCATGCA
GGCGGTGCACCTACGGTCGCTTCCCGATTCCCGCCGGGTTGGCTGGTCAGCGGCGAACCCGCGCGCCTGCCTTCGCCGTT
GTTCGCGGACAGCTGCGACGAGCGGAGCTGGTCCTGGGATGGCGTGGTTTTCGAACAGTGGGCATGGGCGCAGGCCGGCG
ACAGCAACGACCGCTCCTGCGTGCTGAGGGTCGAGGCCGATGGCGAAGTCCTGCTGCTGACCGGGGACATGTCGCGTGCG
GCCGAGCATGCCTGGCTGGCGCGACAGGCCGATCCGCGGGTCGACTGGTTGCTGGCGCCGCACCACGGCAGCCGCAGCTC
CTCCGGAGTCGCCTTCGTGTTGCGTACGCGGCCTCGCCATGTGCTGGTCTCGCGAGGTTGGCGCAACGCCTTCGGCCATC
CCCATGGCGAAGTGATGGAGCGTTACGCGAGGGTCGCCGCGCAGGTCCACGACACGGCACGCGACGGTGCCCTGACGTTT
CTCCTCGGAAGCCGTGGCGGTGCACGCCGGGAGCGTGATTCGGCGCACTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (21-168)

• Competence protein (Competence) (201-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-666)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	58.807	97.301	0.572
comA	Ralstonia pseudosolanacearum GMI1000	35.611	100	0.366