Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ACK3B6_RS16370 Genome accession   NZ_CP176792
Coordinates   3188595..3190895 (-) Length   766 a.a.
NCBI ID   WP_105991649.1    Uniprot ID   -
Organism   Bacillus halotolerans strain BCP32     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3183595..3195895
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK3B6_RS16330 (ACK3B6_16330) - 3184063..3184494 (+) 432 WP_044158935.1 Na(+)/H(+) antiporter subunit B -
  ACK3B6_RS16335 (ACK3B6_16335) - 3184494..3184835 (+) 342 WP_105955471.1 Na(+)/H(+) antiporter subunit C -
  ACK3B6_RS16340 (ACK3B6_16340) - 3184828..3186309 (+) 1482 WP_416042834.1 Na+/H+ antiporter subunit D -
  ACK3B6_RS16345 (ACK3B6_16345) - 3186315..3186791 (+) 477 WP_101864138.1 Na+/H+ antiporter subunit E -
  ACK3B6_RS16350 (ACK3B6_16350) - 3186791..3187075 (+) 285 WP_024122677.1 Na(+)/H(+) antiporter subunit F1 -
  ACK3B6_RS16355 (ACK3B6_16355) mnhG 3187059..3187433 (+) 375 WP_105955473.1 monovalent cation/H(+) antiporter subunit G -
  ACK3B6_RS16360 (ACK3B6_16360) - 3187472..3187852 (-) 381 WP_024122679.1 hotdog fold thioesterase -
  ACK3B6_RS16365 (ACK3B6_16365) comA 3187870..3188514 (-) 645 WP_101864137.1 two-component system response regulator ComA Regulator
  ACK3B6_RS16370 (ACK3B6_16370) comP 3188595..3190895 (-) 2301 WP_105991649.1 histidine kinase Regulator
  ACK3B6_RS16375 (ACK3B6_16375) comX 3190907..3191071 (-) 165 WP_105991648.1 competence pheromone ComX -
  ACK3B6_RS16380 (ACK3B6_16380) - 3191084..3191944 (-) 861 WP_105991687.1 polyprenyl synthetase family protein -
  ACK3B6_RS16385 (ACK3B6_16385) degQ 3192129..3192269 (-) 141 WP_024122683.1 degradation enzyme regulation protein DegQ Regulator
  ACK3B6_RS16390 (ACK3B6_16390) - 3192730..3193098 (+) 369 WP_105955477.1 hypothetical protein -
  ACK3B6_RS16395 (ACK3B6_16395) - 3193074..3194303 (-) 1230 WP_059334756.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88410.57 Da        Isoelectric Point: 8.0665

>NTDB_id=1083023 ACK3B6_RS16370 WP_105991649.1 3188595..3190895(-) (comP) [Bacillus halotolerans strain BCP32]
MKAWYNKVSILLILVSLVYVTYLTYISSSKLLVGAAVAKNHDNEVVVTNIEEFSTAYYSGLQKGDVIKSINNHKVKRPLE
VQKYNSNHVSSIVVERDGEKVRVKPDLMNDGNFTTFVIPLIFYIACLFCCFFVLKINESKKLFSALILIIFLLSASLAYL
SAGGSAKGDLLSRCIMVFTLTSVMLNYLLFLYQYFKELGTVLFNKKVFILYSIPVLNLVFELFRTQLFFRHYVPKINLLS
FFISFIIVSVYFGSILIKSKDTEQAHIIKVLTIINILSFSPFLFLYIIPYVFLGTDGISSFLAASFMFLIPFSLVYQFMT
NKIYNVDFILSRLKYYGILALTPTIILVTVFELMGSPAGDYYYFRLAILMYMIMVAVFYYKEVLDFRFRLKRVSEKFNYQ
DSTYKFTQLIRDSTSLTQVFEELKNTILEVSLVSRAHVYEVSADGSIKLHEELNVNSFEKVYQKEFKKVTSEIGKIVEFN
KGFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTI
EEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKDDDPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGL
VKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATEVLIMLISIQNKIVLHYEDDGVGF
DLEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEMEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=1083023 ACK3B6_RS16370 WP_105991649.1 3188595..3190895(-) (comP) [Bacillus halotolerans strain BCP32]
ATGAAGGCATGGTACAACAAAGTTTCAATTTTGTTGATTTTAGTAAGTTTAGTTTATGTAACTTATTTAACGTATATAAG
TTCGAGTAAACTTTTAGTTGGTGCAGCGGTAGCCAAAAACCATGACAATGAAGTTGTGGTAACAAACATTGAGGAATTCT
CTACGGCTTACTATTCTGGATTACAAAAAGGGGACGTTATTAAAAGCATTAATAATCATAAAGTTAAACGTCCTCTTGAA
GTTCAAAAATATAATTCAAACCATGTGAGTTCAATAGTCGTCGAGAGGGATGGAGAAAAGGTTAGGGTTAAGCCTGATTT
AATGAATGATGGGAATTTTACTACTTTTGTAATCCCACTAATATTTTATATAGCTTGTCTATTTTGTTGTTTCTTTGTCC
TGAAAATAAATGAATCGAAAAAATTATTCTCTGCTTTAATTTTAATCATTTTTTTGTTATCTGCTTCTTTAGCATATTTA
AGTGCGGGTGGATCCGCAAAGGGGGATTTGTTAAGCAGATGTATAATGGTATTCACTTTAACATCTGTAATGCTTAACTA
TCTTCTCTTCTTATATCAGTATTTTAAAGAGCTAGGCACTGTGTTATTTAACAAAAAAGTTTTTATATTATATTCAATTC
CAGTATTAAATCTAGTTTTTGAATTGTTTCGTACTCAACTTTTCTTTAGGCATTATGTGCCTAAAATAAATTTACTATCA
TTCTTTATTTCATTTATAATCGTGAGCGTTTATTTTGGATCTATTTTAATTAAAAGTAAGGATACTGAACAAGCGCATAT
TATAAAAGTTCTTACCATAATTAATATTTTATCTTTTTCGCCGTTTTTGTTTTTATATATAATACCTTATGTATTCTTAG
GTACAGATGGCATTTCTTCTTTTCTAGCTGCTTCTTTTATGTTCCTAATACCATTTTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTGGACTTTATTTTAAGCAGGTTAAAATATTATGGAATATTAGCATTAACGCCCACAATTATTTT
AGTTACTGTATTTGAGTTAATGGGAAGCCCAGCTGGAGATTACTATTATTTCAGACTTGCGATTCTGATGTATATGATTA
TGGTGGCAGTGTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAGAGAGTTTCGGAAAAATTTAATTATCAA
GACAGCACATATAAATTTACACAGCTGATTAGAGACTCAACCTCCTTGACCCAAGTATTTGAAGAACTGAAAAACACAAT
ACTTGAGGTTTCACTTGTAAGCAGAGCTCATGTTTATGAGGTTTCAGCTGATGGAAGTATTAAACTCCACGAAGAACTTA
ATGTAAATTCATTTGAAAAAGTCTATCAAAAAGAGTTCAAAAAAGTAACATCTGAAATTGGTAAAATTGTTGAATTTAAT
AAGGGATTTGTCATGAAAATAGGTGAACGCGGCGGAAAATCATTTGTGATTCTATGTTTATCTAAAATGAATACGCCCCG
CCTTACGCTTGAAGAACTTTCTTGGCTGAAAACCTTGGCTTTTTATACAAATGTCTCAATCGAAAACGTCATGAAAATTG
AAGAGCTGATGAGTCATTTAGAAGAAATAAAACAACAGGAATCAAACCCCGTTTGGCTCAAAAAACTCATGTACACGATC
GAAGAAAAACAACGTTCTGATCTCGCCCGCGATCTCCACGATTCAGTTCTTCAGGATTTGATTTCATTAAAACGGCAGTG
TGAACTGTTTTTGGCTGATTTTAAGAAGGATGATGATCCATGTCGTGAAGAGGTGCAGGACAAGCTCGTACAGATGAATG
AGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAATTGCGGCCGCAGCTTTTGTATGATTTGGGACTG
GTGAAGGCGCTGTCTAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGCTTAAATACCGGCAGATTTAC
GGCGTCGCTTGATTTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTTTATCAAATGCAGTGAAACACTCTC
AGGCGACGGAAGTGCTTATCATGCTGATCAGTATTCAGAACAAAATTGTTCTTCATTATGAGGACGATGGTGTCGGATTT
GATCTAGAGAAAAATAACGAACATTCCATGAGTATGGGTCTTTCTGGCATTAAGGAGCGAGTCAGGGCTTTAGATGGACG
CCTCCGAATCGAAACAAGTGAAGGAAAGGGATTTAAGGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

57.712

100

0.586


Multiple sequence alignment