Detailed information NTG1082836

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ACLH0I_RS21060
• Genome accession: NZ_CP176770
• Coordinates: 4893807..4896053 (-)
• Length: 748 a.a.
• NCBI ID: WP_411385294.1
• Uniprot ID: -
• Organism: Pseudomonas sp. MPB03
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4888807..4901053

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLH0I_RS21025 (ACLH0I_21025)	murB	4889191..4890210 (-)	1020	WP_411385292.1	UDP-N-acetylmuramate dehydrogenase	-
ACLH0I_RS21030 (ACLH0I_21030)	-	4890207..4890671 (-)	465	WP_186707183.1	low molecular weight protein-tyrosine-phosphatase	-
ACLH0I_RS21035 (ACLH0I_21035)	kdsB	4890671..4891435 (-)	765	WP_186707182.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACLH0I_RS21040 (ACLH0I_21040)	-	4891432..4891617 (-)	186	WP_003179363.1	Trm112 family protein	-
ACLH0I_RS21045 (ACLH0I_21045)	lpxK	4891641..4892651 (-)	1011	WP_411385293.1	tetraacyldisaccharide 4'-kinase	-
ACLH0I_RS21050 (ACLH0I_21050)	-	4892651..4893079 (-)	429	WP_250962532.1	ExbD/TolR family protein	-
ACLH0I_RS21055 (ACLH0I_21055)	exbB	4893076..4893711 (-)	636	WP_024616893.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
ACLH0I_RS21060 (ACLH0I_21060)	comA	4893807..4896053 (-)	2247	WP_411385294.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACLH0I_RS21065 (ACLH0I_21065)	-	4896199..4896714 (+)	516	WP_046063671.1	DUF2062 domain-containing protein	-
ACLH0I_RS21070 (ACLH0I_21070)	-	4896915..4897694 (-)	780	WP_411387542.1	ABC transporter permease	-
ACLH0I_RS21075 (ACLH0I_21075)	-	4897697..4898629 (-)	933	WP_186707178.1	ABC transporter ATP-binding protein	-
ACLH0I_RS21080 (ACLH0I_21080)	-	4898766..4899389 (-)	624	WP_411385295.1	glutathione S-transferase family protein	-
ACLH0I_RS21085 (ACLH0I_21085)	-	4899434..4900093 (-)	660	WP_411385296.1	transglutaminase-like domain-containing protein	-

Sequence

Protein

• Length: 748 a.a.
• Molecular weight: 81125.37 Da
• Isoelectric Point: 10.1290

>NTDB_id=1082836 ACLH0I_RS21060 WP_411385294.1 4893807..4896053(-) (comA) [Pseudomonas sp. MPB03]
MRTGLVALALGLVAPIFLPALPPLWLVAAMPLLALMVLPFRTYPLGFFLFGLAWACLSAQWALDDRLPATLDGETRWVEG
RVVGLPQQGDGVVRFGLADVQSRRTRLPKTLRLAWFGGPPINSGERWRLAVKLKRPAGLLNPHGFDYAAWLLSRGIGATG
TIKQGRLLQAARGAWRDEVRQALAQVDAYGRSGALAALVLGDGGGLSREDWQVLQDTGTVHLLVISGQHIGLLAGLVYLL
VAGAARYGLWPAGLAWLPWACALAFCAALGYGLLAGFEVPVRRACAMIGLVLLWRLRFKQPDPWWAWLLAFAGVLVFDPL
ASLRPGFWLSFAAVAILMFTFGARLGPWRWWQTWTRAQWLVALGLCPLLLIVGLPVSLSGPLVNLIAVPWISLLVLPPAL
LGTALLPVPLIGEGLLWIAGGLLDLLFRGLALVAGRLPAWVPVAVPSWALGIAALGAFLLLLPKGVPLRLLGWPMVLLMV
FPPRENLPPGHAEVWQLDVGQGLAVLVRTRHHTLLYDAGPRFGEADVGERVVLPTLRKLGVHGLDLMLLSHADADHAGGA
RAVRKGLPTMEVISGDPDALPEQLQAGPCDSGRRWEWDGVGFELWRWASAVESNQKSCVLLVEAGGERLLLTGDIDTHAE
RALLDEALALPIQWLAAPHHGSRSSSSMALLSRLKPHSVLISRGQGNAFGHPHPQVMARYRRSGLAIYDSAEQGAIRLQL
GAFELPRTEAGHRRYWRDPPGVGPPRQH

Nucleotide

• Length: 2247 bp

>NTDB_id=1082836 ACLH0I_RS21060 WP_411385294.1 4893807..4896053(-) (comA) [Pseudomonas sp. MPB03]
ATGCGCACAGGATTAGTCGCGCTTGCACTGGGGCTGGTGGCCCCGATTTTTTTACCGGCACTGCCGCCGTTGTGGCTGGT
TGCAGCCATGCCGCTGCTGGCGTTGATGGTGTTGCCGTTTCGAACCTACCCGCTGGGTTTTTTCCTGTTCGGGCTGGCCT
GGGCCTGCCTGTCGGCGCAGTGGGCGCTGGACGACCGGTTACCCGCTACCCTGGACGGAGAAACCCGCTGGGTCGAAGGG
CGCGTCGTCGGTTTGCCGCAACAGGGCGACGGCGTGGTGCGCTTCGGACTGGCCGATGTCCAATCACGTCGTACCCGGTT
ACCGAAAACGCTGCGCCTCGCCTGGTTTGGTGGCCCGCCCATCAACAGCGGCGAACGCTGGCGATTGGCAGTGAAGCTCA
AGCGACCCGCCGGGTTGCTGAACCCGCACGGCTTCGATTATGCCGCCTGGTTGTTGAGCCGGGGTATCGGCGCGACCGGG
ACGATCAAGCAAGGGCGTCTCCTGCAAGCGGCCCGGGGCGCCTGGCGTGACGAGGTGCGCCAGGCGCTGGCACAGGTCGA
TGCCTACGGCCGCTCCGGTGCGCTGGCGGCATTGGTCCTGGGTGACGGTGGCGGGCTGAGTCGCGAGGATTGGCAGGTGT
TGCAGGACACCGGCACCGTTCATTTGCTGGTAATTTCCGGGCAACACATCGGCCTGCTTGCCGGCCTGGTGTACCTGCTG
GTGGCCGGCGCGGCGCGTTATGGCCTTTGGCCGGCGGGGCTCGCGTGGTTGCCTTGGGCCTGTGCGCTGGCCTTTTGCGC
CGCCCTGGGCTACGGCTTGCTCGCCGGGTTCGAGGTGCCGGTGCGACGGGCCTGCGCGATGATCGGCCTGGTGTTGTTGT
GGCGCTTGCGCTTCAAGCAGCCTGATCCCTGGTGGGCTTGGCTACTGGCCTTCGCCGGGGTGCTGGTGTTCGACCCGCTC
GCCAGCCTGCGGCCGGGATTTTGGTTGTCGTTCGCGGCCGTCGCCATCTTGATGTTCACCTTTGGTGCTCGCCTGGGGCC
CTGGCGCTGGTGGCAAACCTGGACCCGAGCCCAGTGGCTGGTTGCGCTCGGCCTGTGTCCGCTGCTGTTGATCGTGGGCT
TGCCGGTCAGCCTCAGCGGACCGCTGGTGAACTTGATCGCGGTGCCGTGGATCAGCCTGCTGGTCTTGCCGCCGGCGCTG
CTCGGCACGGCGTTGTTGCCGGTGCCGCTCATCGGTGAAGGGCTGCTGTGGATCGCCGGCGGTTTACTCGATCTGCTGTT
CAGGGGGCTGGCGTTGGTGGCCGGGCGATTGCCCGCCTGGGTGCCGGTTGCGGTCCCGTCCTGGGCCTTGGGTATCGCCG
CCCTGGGGGCTTTTTTGCTGCTATTGCCCAAAGGGGTGCCGCTGCGCTTGCTGGGGTGGCCGATGGTCTTGCTGATGGTG
TTCCCGCCGCGAGAGAACCTGCCGCCAGGGCACGCCGAGGTCTGGCAACTGGACGTCGGCCAAGGACTGGCGGTGCTGGT
ACGCACCCGGCATCACACCTTGCTTTACGACGCCGGGCCGCGTTTTGGCGAGGCCGACGTGGGCGAACGTGTCGTGCTGC
CGACCTTGCGTAAACTCGGCGTGCACGGCTTGGACCTGATGCTTCTCAGCCATGCCGACGCCGATCATGCCGGCGGCGCC
CGCGCCGTGCGCAAGGGACTGCCGACGATGGAAGTGATCAGTGGCGATCCCGACGCGCTGCCTGAGCAATTGCAGGCTGG
GCCTTGCGACAGCGGCAGGCGTTGGGAGTGGGATGGCGTCGGGTTCGAGCTGTGGCGGTGGGCCTCTGCCGTCGAAAGCA
ACCAGAAGTCCTGCGTGCTGCTGGTGGAGGCCGGCGGCGAACGCCTGCTGCTGACCGGCGATATCGACACCCACGCCGAG
CGCGCCCTGCTCGACGAAGCCTTGGCGCTGCCGATCCAGTGGCTGGCCGCGCCTCATCACGGCAGCCGCAGCTCGTCGTC
GATGGCCTTGCTGTCGCGCCTCAAGCCGCATTCGGTGCTGATCTCCCGAGGGCAGGGCAACGCGTTCGGTCATCCCCATC
CCCAAGTGATGGCCCGGTACCGCCGCTCGGGCCTGGCGATTTACGACAGCGCCGAGCAGGGTGCCATTCGTCTGCAACTG
GGCGCGTTCGAGTTGCCGCGCACCGAGGCCGGGCACCGACGCTACTGGCGCGATCCGCCCGGCGTCGGGCCACCGCGGCA
ACATTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (22-166)

• Competence protein (Competence) (198-463)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-676)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	60.754	95.722	0.582