Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   AACH71_RS14840 Genome accession   NZ_AP029050
Coordinates   2922754..2922873 (-) Length   39 a.a.
NCBI ID   WP_136653888.1    Uniprot ID   -
Organism   Bacillus stercoris strain BST19     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 2917754..2927873
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AACH71_RS14820 (BSB_28360) - 2918112..2920187 (-) 2076 WP_136653889.1 transglycosylase domain-containing protein -
  AACH71_RS14825 (BSB_28370) speE 2920389..2921219 (+) 831 WP_003227543.1 spermidine synthase -
  AACH71_RS14830 (BSB_28380) speB 2921280..2922152 (+) 873 WP_003227545.1 agmatinase -
  AACH71_RS14835 (BSB_28390) - 2922087..2922656 (-) 570 WP_252153564.1 YbaK/EbsC family protein -
  AACH71_RS14840 (BSB_28400) phrF 2922754..2922873 (-) 120 WP_136653888.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  AACH71_RS14845 (BSB_28410) rapF 2922857..2924002 (-) 1146 WP_040081517.1 response regulator aspartate phosphatase RapF Regulator
  AACH71_RS14850 (BSB_28420) - 2924232..2925587 (+) 1356 WP_136653887.1 YncE family protein -
  AACH71_RS14855 (BSB_28430) - 2925627..2927003 (+) 1377 WP_095432265.1 YncE family protein -
  AACH71_RS14860 (BSB_28440) - 2927009..2927710 (-) 702 WP_136653886.1 bacteriocin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4226.12 Da        Isoelectric Point: 10.4997

>NTDB_id=108283 AACH71_RS14840 WP_136653888.1 2922754..2922873(-) (phrF) [Bacillus stercoris strain BST19]
MKLKSKILLSCLALSTVFIATNIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=108283 AACH71_RS14840 WP_136653888.1 2922754..2922873(-) (phrF) [Bacillus stercoris strain BST19]
ATGAAATTGAAGTCTAAAATATTACTCTCTTGTCTGGCCCTAAGTACTGTTTTCATCGCAACGAATATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

92.593

69.231

0.641
  phrC Bacillus subtilis subsp. subtilis str. 168

46.154

100

0.462

Multiple sequence alignment