Detailed information NTG0108284

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: AACH71_RS14845
• Genome accession: NZ_AP029050
• Coordinates: 2922857..2924002 (-)
• Length: 381 a.a.
• NCBI ID: WP_040081517.1
• Uniprot ID: -
• Organism: Bacillus stercoris strain BST19
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2917857..2929002

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AACH71_RS14820 (BSB_28360)	-	2918112..2920187 (-)	2076	WP_136653889.1	transglycosylase domain-containing protein	-
AACH71_RS14825 (BSB_28370)	speE	2920389..2921219 (+)	831	WP_003227543.1	spermidine synthase	-
AACH71_RS14830 (BSB_28380)	speB	2921280..2922152 (+)	873	WP_003227545.1	agmatinase	-
AACH71_RS14835 (BSB_28390)	-	2922087..2922656 (-)	570	WP_252153564.1	YbaK/EbsC family protein	-
AACH71_RS14840 (BSB_28400)	phrF	2922754..2922873 (-)	120	WP_136653888.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
AACH71_RS14845 (BSB_28410)	rapF	2922857..2924002 (-)	1146	WP_040081517.1	response regulator aspartate phosphatase RapF	Regulator
AACH71_RS14850 (BSB_28420)	-	2924232..2925587 (+)	1356	WP_136653887.1	YncE family protein	-
AACH71_RS14855 (BSB_28430)	-	2925627..2927003 (+)	1377	WP_095432265.1	YncE family protein	-
AACH71_RS14860 (BSB_28440)	-	2927009..2927710 (-)	702	WP_136653886.1	bacteriocin biosynthesis protein AlbG	-
AACH71_RS14865 (BSB_28450)	-	2927707..2928987 (-)	1281	WP_136653885.1	pitrilysin family protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45666.02 Da
• Isoelectric Point: 5.1513

>NTDB_id=108284 AACH71_RS14845 WP_040081517.1 2922857..2924002(-) (rapF) [Bacillus stercoris strain BST19]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDHMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGVLDYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFKKAYSMAEAENQPQLMGRTLYNIGLCKNSQSQYED
AVTYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHAYHSKGIAYSQEAGDSIYLSEFEFLKSLYLSGPDEEAI
QRFFDFLESKMLYADLEDFALDVAKYYHERENFQKASAYFLKVEQVRQLIQGGVRLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=108284 AACH71_RS14845 WP_040081517.1 2922857..2924002(-) (rapF) [Bacillus stercoris strain BST19]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCATATGGAAGAAGACCAAGATCTTCATTTGTACTATT
CACTGATGGAATTCCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCAAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGAGTCCTTGATTATTACTTTAATTTCTTCAG
GGGCATGTATGAACTGGACCAGCGGGAATATCTGTCTGCTATTAAATTTTTCAAGAAGGCTGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAGTCTTATTACTACATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAGGCATATGAAATATACAAAGAACATGAAGCGTATAATATAAGGTTGCTTCAGTGTCACTCTTT
ATTTGCTACTAATTTCTTAGATCTGAAACAATATGAGGATGCCATATCACATTTTAAAAAAGCTTACTCTATGGCGGAAG
CTGAGAATCAGCCCCAATTGATGGGGAGAACCTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCGTAACATATTTCAAAAGAGCAATAGCTGTTTTTGAGGAATCTAATATTCTTCCTTCCCTGCCCCAAGCCTATTTTTT
GATTACACAAATTCATTATAAATTGGGAAAAATGGATAAAGCCCATGCATATCATAGTAAGGGAATAGCTTATTCTCAAG
AGGCCGGGGATTCAATCTATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCTGATGAAGAAGCAATT
CAAAGGTTCTTTGATTTCCTCGAAAGTAAAATGTTGTATGCCGATCTTGAAGATTTCGCTCTTGATGTGGCAAAATATTA
TCACGAACGTGAAAATTTTCAAAAAGCTTCTGCTTATTTCTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGATTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-207)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	95.801	100	0.958
rapC	Bacillus subtilis subsp. subtilis str. 168	57.895	99.738	0.577