Detailed information    

insolico Bioinformatically predicted

Overview

Name   recN   Type   Machinery gene
Locus tag   AACH71_RS00755 Genome accession   NZ_AP029050
Coordinates   126220..127950 (+) Length   576 a.a.
NCBI ID   WP_014664556.1    Uniprot ID   -
Organism   Bacillus stercoris strain BST19     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 121220..132950
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AACH71_RS00730 (BSB_01440) - 121584..121838 (+) 255 WP_003226409.1 exodeoxyribonuclease VII small subunit -
  AACH71_RS00735 (BSB_01450) - 121828..122718 (+) 891 WP_014664560.1 polyprenyl synthetase family protein -
  AACH71_RS00740 (BSB_01460) dxs 122894..124795 (+) 1902 WP_069839471.1 1-deoxy-D-xylulose-5-phosphate synthase -
  AACH71_RS00745 (BSB_01470) - 124792..125637 (+) 846 WP_136654204.1 TlyA family RNA methyltransferase -
  AACH71_RS00750 (BSB_01480) argR 125734..126183 (+) 450 WP_003230265.1 arginine repressor ArgR -
  AACH71_RS00755 (BSB_01490) recN 126220..127950 (+) 1731 WP_014664556.1 DNA repair protein RecN Machinery gene
  AACH71_RS00760 (BSB_01500) spoIVB 128124..129404 (+) 1281 WP_069149849.1 SpoIVB peptidase -
  AACH71_RS00765 (BSB_01510) spo0A 129680..130483 (+) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  AACH71_RS00770 (BSB_01520) - 130629..130808 (+) 180 WP_014664554.1 hypothetical protein -
  AACH71_RS00775 (BSB_01530) - 131024..132142 (-) 1119 WP_041521374.1 NADH-dependent flavin oxidoreductase -
  AACH71_RS00780 - 132215..132349 (-) 135 WP_014664551.1 hypothetical protein -
  AACH71_RS00785 (BSB_01540) - 132653..132949 (+) 297 WP_069150774.1 hypothetical protein -

Sequence

Protein


Download         Length: 576 a.a.        Molecular weight: 64607.44 Da        Isoelectric Point: 4.7370

>NTDB_id=108239 AACH71_RS00755 WP_014664556.1 126220..127950(+) (recN) [Bacillus stercoris strain BST19]
MLAELSIKNFAIIEELTVSFERGLTVLTGETGAGKSIIIDAISLLVGGRGSSEFVRYGEAKAELEGLFLLESGHPVLGVC
AEQGIDVSDEMIVMRRDISTSGKSVCRVNGKLVTIASLREIGRLLLDIHGQHDNQLLMEDENHLQLLDKFAGAEVESALQ
AYQEGYQRYMKLLKKLKQLSESEQEMAHRLDLIQFQLEEIESAKLEINEDEQLQEERQQISNFEKIYESLQNAYNALRSE
QSGLDWVGMASAQLEDISDINEPLKKLSESVSNSYYLLEDATFQMRNMLDELEYDPERLNYIETRLNEIKQLKRKYGATV
EDILEYASKIEEEIDQIENRDSHLQSLKKELDSVGKDVAVEAANVSQIRKTWAKKLADEIHRELKSLYMEKSTFDTEFKI
RQASRNEEAPVVNGQPVQLTEQGIDLVKFLISTNTGEPLKSLSKVASGGELSRVMLAIKSIFSSQQDVTSIIFDEVDTGV
SGRVAQAIAEKIHKVSIGSQVLCITHLPQVAAMADTHLYIAKELKDGRTTTRVKPLSKQEKIVEIGRMIAGVEVTDLTKR
HAKELLKQADQVKTTG

Nucleotide


Download         Length: 1731 bp        

>NTDB_id=108239 AACH71_RS00755 WP_014664556.1 126220..127950(+) (recN) [Bacillus stercoris strain BST19]
TTGTTAGCTGAACTATCGATTAAAAACTTTGCCATTATTGAGGAACTGACGGTTTCTTTTGAACGCGGGCTTACGGTTTT
AACAGGAGAAACCGGAGCCGGCAAATCCATCATCATAGATGCCATTTCTCTTTTAGTCGGAGGCCGCGGATCATCTGAAT
TTGTTAGATATGGAGAAGCGAAAGCAGAACTTGAAGGGCTGTTTCTTTTGGAGAGCGGCCATCCCGTTTTAGGCGTATGC
GCTGAGCAGGGAATCGACGTTTCAGACGAAATGATCGTCATGAGAAGAGATATCAGCACGAGCGGGAAAAGCGTTTGCCG
TGTCAATGGCAAGCTTGTCACGATTGCCTCGCTAAGAGAGATCGGCAGGCTTTTATTAGATATTCACGGGCAGCACGATA
ACCAGCTGTTAATGGAAGACGAAAATCATCTCCAGCTCTTGGACAAGTTTGCCGGAGCCGAAGTGGAAAGCGCGCTCCAA
GCGTATCAGGAAGGGTACCAGCGGTATATGAAGCTGCTCAAAAAGCTTAAACAGCTTTCTGAAAGCGAACAGGAAATGGC
CCATCGCCTTGATCTCATTCAATTTCAGCTCGAAGAAATCGAATCAGCAAAGCTTGAGATCAACGAAGATGAACAGCTTC
AAGAAGAGCGTCAGCAAATTTCAAACTTTGAGAAGATATATGAATCGCTGCAAAATGCATATAATGCGCTTCGCAGTGAA
CAGAGCGGATTGGACTGGGTCGGAATGGCATCAGCCCAGCTTGAAGATATATCTGATATTAACGAACCGCTGAAAAAACT
GTCTGAGAGTGTTTCGAACTCCTACTATCTGCTTGAGGACGCTACATTTCAGATGAGAAATATGCTGGATGAGCTTGAAT
ATGATCCGGAACGCCTGAACTATATTGAGACGCGGCTCAATGAAATCAAACAGCTGAAACGAAAATACGGTGCCACTGTC
GAGGACATTTTGGAATATGCTTCTAAAATTGAAGAAGAAATTGACCAAATTGAAAACAGGGACAGCCACCTACAAAGCCT
GAAAAAGGAGCTTGACTCCGTTGGCAAGGATGTCGCAGTGGAAGCGGCAAATGTGTCTCAAATCCGGAAAACATGGGCGA
AAAAACTGGCTGATGAGATTCATCGGGAATTAAAAAGCCTGTACATGGAAAAATCAACGTTTGATACGGAATTCAAAATC
AGACAAGCGTCACGCAATGAAGAGGCACCGGTTGTAAACGGCCAGCCTGTTCAGCTGACTGAACAAGGGATCGATCTGGT
GAAGTTTTTAATTTCAACCAATACAGGCGAGCCGCTGAAATCTCTTTCGAAAGTTGCTTCAGGTGGAGAGCTGTCACGGG
TGATGCTTGCCATAAAAAGCATTTTTTCCTCACAGCAGGATGTGACATCGATCATTTTTGATGAGGTTGATACCGGTGTA
AGCGGCAGGGTCGCACAGGCAATCGCTGAGAAGATCCATAAAGTGTCAATAGGATCACAAGTGCTTTGTATTACACACTT
GCCTCAGGTGGCTGCCATGGCCGATACGCATCTTTATATTGCGAAGGAGTTAAAAGACGGCAGAACGACGACACGTGTCA
AGCCGCTTTCTAAGCAGGAAAAAATAGTGGAAATCGGACGCATGATTGCAGGTGTCGAGGTAACCGATTTAACGAAACGC
CATGCGAAAGAACTTTTAAAACAAGCGGATCAAGTCAAAACAACTGGGTAA

Domains

Predicted by InterproScan.

AAA domain (AAA_23)

(4-228)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recN Bacillus subtilis subsp. subtilis str. 168

97.917

100

0.979

Multiple sequence alignment