Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   AACH71_RS00765 Genome accession   NZ_AP029050
Coordinates   129680..130483 (+) Length   267 a.a.
NCBI ID   WP_003226427.1    Uniprot ID   -
Organism   Bacillus stercoris strain BST19     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 124680..135483
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AACH71_RS00745 (BSB_01470) - 124792..125637 (+) 846 WP_136654204.1 TlyA family RNA methyltransferase -
  AACH71_RS00750 (BSB_01480) argR 125734..126183 (+) 450 WP_003230265.1 arginine repressor ArgR -
  AACH71_RS00755 (BSB_01490) recN 126220..127950 (+) 1731 WP_014664556.1 DNA repair protein RecN Machinery gene
  AACH71_RS00760 (BSB_01500) spoIVB 128124..129404 (+) 1281 WP_069149849.1 SpoIVB peptidase -
  AACH71_RS00765 (BSB_01510) spo0A 129680..130483 (+) 804 WP_003226427.1 sporulation transcription factor Spo0A Regulator
  AACH71_RS00770 (BSB_01520) - 130629..130808 (+) 180 WP_014664554.1 hypothetical protein -
  AACH71_RS00775 (BSB_01530) - 131024..132142 (-) 1119 WP_041521374.1 NADH-dependent flavin oxidoreductase -
  AACH71_RS00780 - 132215..132349 (-) 135 WP_014664551.1 hypothetical protein -
  AACH71_RS00785 (BSB_01540) - 132653..132949 (+) 297 WP_069150774.1 hypothetical protein -
  AACH71_RS00790 (BSB_01550) - 132969..133589 (+) 621 WP_136654203.1 N-acetylmuramoyl-L-alanine amidase -
  AACH71_RS00795 (BSB_01560) - 133667..134398 (+) 732 WP_136654202.1 glycerophosphodiester phosphodiesterase -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29691.19 Da        Isoelectric Point: 6.3913

>NTDB_id=108240 AACH71_RS00765 WP_003226427.1 129680..130483(+) (spo0A) [Bacillus stercoris strain BST19]
MEKIKVCVADDNRELVSLLSEYIEGQEDMEVIGVAYNGQECLSLFKEKDPDVLVLDIIMPHLDGLAVLERLRESDLKKQP
NVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNASSVTHRAPSSQSSIIRSSQPEPKKKNLDASITSI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMTKAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=108240 AACH71_RS00765 WP_003226427.1 129680..130483(+) (spo0A) [Bacillus stercoris strain BST19]
GTGGAGAAAATTAAAGTTTGTGTTGCTGATGATAATCGAGAGCTGGTAAGCCTGTTGAGTGAATATATAGAAGGACAGGA
AGACATGGAAGTGATCGGCGTTGCTTATAACGGACAGGAATGCCTGTCGTTGTTTAAAGAAAAAGATCCCGATGTGCTCG
TATTAGATATTATTATGCCGCATTTAGACGGACTTGCGGTTTTAGAGAGGCTGAGGGAATCAGATCTGAAAAAACAGCCG
AATGTCATCATGCTGACAGCCTTTGGACAGGAAGATGTCACGAAAAAGGCCGTCGATTTAGGCGCGTCCTACTTTATTCT
CAAACCGTTTGATATGGAAAACCTTGTTGGTCATATCCGCCAAGTCAGCGGAAATGCCAGCAGTGTGACGCATCGTGCGC
CATCATCGCAAAGCAGCATTATACGCAGCAGCCAGCCTGAACCAAAGAAGAAAAATCTCGACGCGAGCATCACAAGCATT
ATCCATGAAATCGGCGTCCCAGCCCATATTAAAGGCTATCTCTATCTGCGTGAAGCAATCTCAATGGTATACAATGACAT
CGAATTGCTCGGCAGCATTACAAAAGTCCTCTATCCGGACATCGCCAAAAAATTCAACACAACCGCAAGCCGTGTAGAAA
GAGCGATCCGCCATGCAATTGAAGTGGCATGGAGCAGAGGAAACATTGATTCCATTTCCTCGCTGTTCGGTTATACTGTC
AGCATGACAAAAGCTAAACCGACAAACTCAGAGTTCATTGCGATGGTTGCGGATAAGCTTAGATTAGAACATAAGGCTTC
TTAA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment