Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | AACH71_RS00570 | Genome accession | NZ_AP029050 |
| Coordinates | 95514..95849 (-) | Length | 111 a.a. |
| NCBI ID | WP_003226345.1 | Uniprot ID | A0AAE2VGU9 |
| Organism | Bacillus stercoris strain BST19 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 90514..100849
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AACH71_RS00520 (BSB_01020) | comGC | 90541..90837 (+) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| AACH71_RS00525 (BSB_01030) | comGD | 90827..91258 (+) | 432 | WP_136654211.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AACH71_RS00530 (BSB_01040) | comGE | 91242..91589 (+) | 348 | WP_071581437.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| AACH71_RS00535 (BSB_01050) | comGF | 91615..91995 (+) | 381 | WP_014664591.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AACH71_RS00540 (BSB_01060) | comGG | 91996..92370 (+) | 375 | WP_069149864.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| AACH71_RS00545 (BSB_01070) | - | 92442..92621 (+) | 180 | WP_014480252.1 | YqzE family protein | - |
| AACH71_RS00550 (BSB_01080) | - | 92662..92988 (-) | 327 | WP_014664589.1 | YqzG/YhdC family protein | - |
| AACH71_RS00555 (BSB_01090) | tapA | 93260..94015 (+) | 756 | WP_134975341.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AACH71_RS00560 (BSB_01100) | - | 93999..94571 (+) | 573 | WP_080478339.1 | signal peptidase I | - |
| AACH71_RS00565 (BSB_01110) | tasA | 94635..95420 (+) | 786 | WP_014664586.1 | biofilm matrix protein TasA | - |
| AACH71_RS00570 (BSB_01120) | sinR | 95514..95849 (-) | 336 | WP_003226345.1 | transcriptional regulator SinR | Regulator |
| AACH71_RS00575 (BSB_01130) | sinI | 95883..96056 (-) | 174 | WP_003230187.1 | anti-repressor SinI family protein | Regulator |
| AACH71_RS00580 (BSB_01140) | - | 96240..97034 (-) | 795 | WP_069839479.1 | YqhG family protein | - |
| AACH71_RS00585 (BSB_01150) | - | 97055..98728 (-) | 1674 | WP_136654210.1 | SNF2-related protein | - |
| AACH71_RS00590 (BSB_01160) | gcvT | 99170..100258 (+) | 1089 | WP_069149859.1 | glycine cleavage system aminomethyltransferase GcvT | - |
Sequence
Protein
Download Length: 111 a.a. Molecular weight: 12988.64 Da Isoelectric Point: 7.2023
>NTDB_id=108237 AACH71_RS00570 WP_003226345.1 95514..95849(-) (sinR) [Bacillus stercoris strain BST19]
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
MIGQRIKQYRKEKGYSLSELAEKAGVAKSYLSSIERNLQTNPSIQFLEKVSAVLDVSVHTLLDEKHETEYDGQLDSEWEK
LVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
Nucleotide
Download Length: 336 bp
>NTDB_id=108237 AACH71_RS00570 WP_003226345.1 95514..95849(-) (sinR) [Bacillus stercoris strain BST19]
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
TTGATTGGCCAGCGTATTAAACAATACCGTAAAGAAAAAGGCTACTCACTATCAGAACTAGCTGAAAAAGCTGGGGTAGC
GAAGTCTTATTTAAGCTCAATAGAACGAAATCTACAAACGAACCCCTCCATTCAATTTCTCGAAAAAGTCTCCGCTGTTC
TGGACGTCTCGGTTCATACTTTGCTCGATGAGAAACATGAAACCGAATACGATGGTCAATTAGATAGTGAATGGGAGAAA
TTGGTTCGCGATGCAATGACATCCGGGGTATCGAAAAAACAATTTCGTGAATTTTTAGATTATCAAAAATGGAGAAAATC
CCAAAAAGAGGAGTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |