Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ACK2I7_RS08540 Genome accession   NZ_CP176632
Coordinates   1728247..1729014 (+) Length   255 a.a.
NCBI ID   WP_021002248.1    Uniprot ID   A0AAP6EPV9
Organism   Streptococcus anginosus strain SFAD 40     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1723247..1734014
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2I7_RS08510 comE 1723812..1724561 (-) 750 WP_021002244.1 competence system response regulator transcription factor ComE Regulator
  ACK2I7_RS08515 comD/comD2 1724561..1725883 (-) 1323 WP_021002245.1 GHKL domain-containing protein Regulator
  ACK2I7_RS08520 - 1725898..1726047 (-) 150 WP_021002246.1 bacteriocin -
  ACK2I7_RS08530 rlmH 1726329..1726808 (-) 480 WP_041784074.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACK2I7_RS08535 htrA 1727002..1728192 (+) 1191 WP_021002247.1 S1C family serine protease Regulator
  ACK2I7_RS08540 spo0J 1728247..1729014 (+) 768 WP_021002248.1 ParB/RepB/Spo0J family partition protein Regulator
  ACK2I7_RS08545 dnaA 1729243..1730586 (+) 1344 WP_021001132.1 chromosomal replication initiator protein DnaA -
  ACK2I7_RS08550 dnaN 1730743..1731879 (+) 1137 WP_003026819.1 DNA polymerase III subunit beta -
  ACK2I7_RS08555 - 1731879..1732076 (+) 198 WP_003026821.1 DUF951 domain-containing protein -
  ACK2I7_RS08560 - 1732100..1732600 (-) 501 WP_003026823.1 YehR family lipoprotein -
  ACK2I7_RS08565 ychF 1732747..1733862 (+) 1116 WP_003026825.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29696.21 Da        Isoelectric Point: 8.0359

>NTDB_id=1081741 ACK2I7_RS08540 WP_021002248.1 1728247..1729014(+) (spo0J) [Streptococcus anginosus strain SFAD 40]
MEKYQYIELKDIQTNPYQPRKEFSEEKITELANSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLQNIPAIIKE
LTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIAQTMGKSRPYITNSVRLLNLPLNIIEAIKEGNISQGHA
RLLINLSEKEQNLWFDKILSQELSVRQLEKQLHSKQAKTVTKDKQQLFLKEEEKKLKKIFGTEISLQFSEQSQSGKICIH
FSNLEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1081741 ACK2I7_RS08540 WP_021002248.1 1728247..1729014(+) (spo0J) [Streptococcus anginosus strain SFAD 40]
ATGGAAAAATATCAATATATTGAACTTAAGGACATTCAAACTAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTACTGAACTTGCTAATTCTATAAAAGAACATGGGATTATTCAGCCTATCATCGTACGAAAATCTCCAATAATTGGTT
ATGAATTACTAGCTGGTGAAAGACGTTTTAGAGCTGCTAAATTAGCAGGCTTACAAAATATACCAGCTATTATAAAAGAA
TTAACAGATGATGAAATGATGAAGCAAGCTATCATCGAAAATTTACAACGAGAAGATTTAAATCCTATAGAAGAAGCACA
ATCTTACCAATATTTAATTGACAAAGGATTGACGCATAAAGAAATCGCTCAAACTATGGGAAAATCACGTCCTTATATTA
CAAATTCTGTCCGATTATTAAATTTACCTCTCAATATTATTGAAGCGATAAAAGAAGGAAATATTTCTCAAGGACATGCT
CGTCTGCTCATCAATCTCTCAGAGAAAGAGCAAAATCTGTGGTTTGATAAAATCCTATCTCAAGAACTTTCAGTTCGGCA
GTTAGAAAAACAATTGCATTCCAAACAAGCAAAAACAGTAACAAAAGATAAACAGCAACTCTTCCTCAAAGAGGAAGAGA
AAAAATTAAAAAAGATATTTGGTACAGAGATTTCTCTTCAATTTTCTGAACAATCTCAATCAGGGAAAATTTGTATTCAT
TTTTCAAACCTAGAAGAATATCAAAGGATTATTGACAGCTTTAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(146-191)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.118

100

0.541

Multiple sequence alignment