Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   ACKW6F_RS14895 Genome accession   NZ_CP176527
Coordinates   2902455..2902595 (-) Length   46 a.a.
NCBI ID   WP_003213123.1    Uniprot ID   A0A5K1N966
Organism   Bacillus safensis strain D-62     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2897455..2907595
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACKW6F_RS14870 (ACKW6F_14870) - 2897789..2898178 (-) 390 WP_024423321.1 hotdog fold thioesterase -
  ACKW6F_RS14875 (ACKW6F_14875) comA 2898202..2898843 (-) 642 WP_024423322.1 response regulator transcription factor Regulator
  ACKW6F_RS14880 (ACKW6F_14880) comP 2898924..2901215 (-) 2292 WP_024425943.1 ATP-binding protein Regulator
  ACKW6F_RS14885 (ACKW6F_14885) comX 2901229..2901402 (-) 174 WP_024425944.1 competence pheromone ComX -
  ACKW6F_RS14890 (ACKW6F_14890) - 2901380..2902303 (-) 924 WP_024425945.1 polyprenyl synthetase family protein -
  ACKW6F_RS14895 (ACKW6F_14895) degQ 2902455..2902595 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  ACKW6F_RS14900 (ACKW6F_14900) - 2903101..2903457 (+) 357 WP_024425946.1 hypothetical protein -
  ACKW6F_RS14905 (ACKW6F_14905) - 2903493..2904719 (-) 1227 WP_024425947.1 EAL and HDOD domain-containing protein -
  ACKW6F_RS14910 (ACKW6F_14910) - 2904857..2906329 (-) 1473 WP_024425948.1 nicotinate phosphoribosyltransferase -
  ACKW6F_RS14915 (ACKW6F_14915) - 2906347..2906898 (-) 552 WP_149126319.1 cysteine hydrolase family protein -
  ACKW6F_RS14920 (ACKW6F_14920) - 2906959..2907366 (-) 408 WP_024423329.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5677.42 Da        Isoelectric Point: 4.6828

>NTDB_id=1080696 ACKW6F_RS14895 WP_003213123.1 2902455..2902595(-) (degQ) [Bacillus safensis strain D-62]
MEKYEIEELKQLLWKLENEIRETTASLHNINKSIDQYDKYEYVKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=1080696 ACKW6F_RS14895 WP_003213123.1 2902455..2902595(-) (degQ) [Bacillus safensis strain D-62]
ATGGAAAAGTATGAAATCGAAGAACTTAAACAATTATTATGGAAACTTGAAAACGAAATCAGAGAAACAACGGCTTCTCT
TCATAACATTAACAAAAGCATTGATCAATACGACAAATATGAATATGTGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1N966

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

68.085

100

0.696

Multiple sequence alignment