Detailed information NTG1080504

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACK1O1_RS15650
• Genome accession: NZ_CP176505
• Coordinates: 3433590..3434963 (+)
• Length: 457 a.a.
• NCBI ID: WP_249843091.1
• Uniprot ID: -
• Organism: Stenotrophomonas maltophilia strain PSKL1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3428590..3439963

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK1O1_RS15635 (ACK1O1_15635)	sucD	3429467..3430342 (-)	876	WP_005410793.1	succinate--CoA ligase subunit alpha	-
ACK1O1_RS15640 (ACK1O1_15640)	sucC	3430364..3431533 (-)	1170	WP_004154430.1	ADP-forming succinate--CoA ligase subunit beta	-
ACK1O1_RS15645 (ACK1O1_15645)	-	3431916..3433529 (+)	1614	WP_249843092.1	sensor histidine kinase	-
ACK1O1_RS15650 (ACK1O1_15650)	pilR	3433590..3434963 (+)	1374	WP_249843091.1	sigma-54-dependent transcriptional regulator	Regulator
ACK1O1_RS15655 (ACK1O1_15655)	pilB	3435046..3436773 (-)	1728	WP_409460401.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ACK1O1_RS15660 (ACK1O1_15660)	-	3436900..3437805 (-)	906	WP_409460402.1	sterol desaturase family protein	-
ACK1O1_RS15665 (ACK1O1_15665)	-	3437908..3438348 (-)	441	WP_057498795.1	pilin	-

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49393.63 Da
• Isoelectric Point: 6.3580

>NTDB_id=1080504 ACK1O1_RS15650 WP_249843091.1 3433590..3434963(+) (pilR) [Stenotrophomonas maltophilia strain PSKL1]
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPDGNGIELVSEIAQHYPRTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDIAVLRGLVKHALELNNADRPAPGPSAEQGARLLGASPAMDVLRTTIGKVARS
QAPVYILGESGVGKELVARTIHAQGARAAGPFVPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAANEEPVDVRILSATHKDLAELVEDGRFRHDLYYRINVIELKVPPLRERRQDLPE
LAAAVLARLARSHGRGTPLLAPSALEALAQYSFPGNVRELENILERALALAEEDCIGADDLRLPQHSPRAPGSAAPAEAV
ADLQPGSAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1374 bp

>NTDB_id=1080504 ACK1O1_RS15650 WP_249843091.1 3433590..3434963(+) (pilR) [Stenotrophomonas maltophilia strain PSKL1]
ATGAACGAAACCCGCAGCGCCCTCGTCGTCGACGATGAACGCGACATCCGCGAACTGCTGGTCCTGACGCTTGGCCGTAT
GGGGCTGCGCATCAGTACCGCGGCCAACCTTGCCGAGGCGCGCGAGCTGCTGGCCAGCAATCCGTACGACCTGTGCATCA
CCGACATGCGCCTGCCCGACGGCAACGGCATCGAGCTGGTGAGTGAGATTGCCCAGCACTACCCACGCACGCCGGTGGCG
ATGATCACCGCCTTCGGCAGCATGGACCTGGCCGTGGAAGCGCTGAAGGCCGGCGCCTTCGACTTCGTCAGCAAGCCGGT
GGACATCGCCGTGCTGCGCGGGCTGGTCAAGCACGCGCTGGAACTCAACAACGCCGACCGCCCCGCACCCGGCCCCAGTG
CCGAACAGGGCGCGCGGCTGCTGGGCGCCTCGCCGGCGATGGACGTGCTGCGCACCACCATCGGCAAGGTCGCGCGCAGC
CAGGCGCCGGTCTACATCCTGGGTGAATCCGGGGTCGGCAAGGAGCTGGTGGCGCGCACCATCCACGCCCAGGGCGCACG
CGCGGCCGGCCCGTTCGTGCCGGTCAACTGCGGCGCCATCCCGGGCGAACTGATGGAAAGCGAGTTCTTCGGCCATCGCA
AGGGCAGCTTCAGCGGCGCCCATGCCGACAAGCCCGGCCTGTTCCAGGCTGCGCATGGCGGCACCCTGTTCCTGGACGAA
GTGGCCGAGCTGCCGCTGCAGATGCAGGTGAAGTTGCTGCGCGCGATCCAGGAAAAATCGGTGCGCGCGGTCGGCGCCGC
CAACGAAGAACCGGTGGACGTGCGCATCCTCTCGGCCACCCACAAGGACCTGGCCGAGCTGGTCGAGGATGGCCGCTTCC
GCCACGACCTGTATTACCGCATCAATGTGATCGAGCTGAAGGTGCCGCCGCTGCGTGAGCGCCGCCAGGATCTGCCGGAG
CTGGCCGCAGCGGTATTGGCGCGCCTGGCCCGCAGCCATGGACGCGGCACGCCACTGCTGGCGCCTTCAGCCCTGGAGGC
GCTGGCCCAGTACAGCTTCCCCGGTAACGTACGCGAACTGGAGAACATCCTCGAACGCGCGCTGGCGCTGGCCGAAGAAG
ACTGCATCGGTGCTGATGACCTGCGCCTGCCCCAGCATTCACCGCGCGCACCGGGCAGCGCCGCGCCGGCTGAAGCCGTG
GCCGACCTGCAACCCGGGAGCGCCGCCCTGCCCTCGTACATCGAGCAGCTCGAGCGCAGTGCCATCCAGCGCGCGCTGGA
AGAGAACCGCTGGAACAAGACCCGCACCGCGGCACAGCTGGGCATCACCTTCCGTGCATTGCGATACAAGCTGAAAAAGC
TGGGCATGGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

• Sigma-54 interaction domain (Sigma54_activat) (141-306)

• Response regulator receiver domain (Response_reg) (8-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.377	99.781	0.632
pilR	Acinetobacter baumannii strain A118	47.732	100	0.484