Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | ACKWPP_RS00785 | Genome accession | NZ_CP176418 |
| Coordinates | 123005..123958 (+) | Length | 317 a.a. |
| NCBI ID | WP_002936545.1 | Uniprot ID | A0A0Z8FFJ3 |
| Organism | Streptococcus suis strain KKAHC02 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 118005..128958
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACKWPP_RS00745 (ACKWPP_00745) | - | 118268..119218 (-) | 951 | WP_409374002.1 | S66 peptidase family protein | - |
| ACKWPP_RS00750 (ACKWPP_00750) | comYA | 119304..120254 (+) | 951 | WP_023369082.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| ACKWPP_RS00755 (ACKWPP_00755) | comYB | 120166..121203 (+) | 1038 | WP_044680150.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| ACKWPP_RS00760 (ACKWPP_00760) | comYC | 121205..121486 (+) | 282 | WP_044680148.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| ACKWPP_RS00765 (ACKWPP_00765) | comGD | 121467..121874 (+) | 408 | WP_044762031.1 | competence type IV pilus minor pilin ComGD | - |
| ACKWPP_RS00770 (ACKWPP_00770) | comYE | 121846..122139 (+) | 294 | WP_024385126.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| ACKWPP_RS00775 (ACKWPP_00775) | comGF/cglF | 122126..122560 (+) | 435 | WP_074414675.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| ACKWPP_RS00780 (ACKWPP_00780) | comGG | 122538..122948 (+) | 411 | WP_409374003.1 | competence type IV pilus minor pilin ComGG | - |
| ACKWPP_RS00785 (ACKWPP_00785) | comYH | 123005..123958 (+) | 954 | WP_002936545.1 | class I SAM-dependent methyltransferase | Machinery gene |
| ACKWPP_RS00790 (ACKWPP_00790) | - | 124008..125195 (+) | 1188 | WP_014637319.1 | acetate kinase | - |
| ACKWPP_RS00795 (ACKWPP_00795) | - | 125510..126061 (+) | 552 | WP_141587968.1 | folate family ECF transporter S component | - |
| ACKWPP_RS00800 (ACKWPP_00800) | - | 126117..127373 (+) | 1257 | WP_409374004.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
| ACKWPP_RS00805 (ACKWPP_00805) | pepA | 127419..128480 (-) | 1062 | WP_409374005.1 | glutamyl aminopeptidase | - |
| ACKWPP_RS00810 (ACKWPP_00810) | - | 128627..128911 (+) | 285 | WP_024395439.1 | DUF4651 domain-containing protein | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 35731.76 Da Isoelectric Point: 4.3950
>NTDB_id=1080050 ACKWPP_RS00785 WP_002936545.1 123005..123958(+) (comYH) [Streptococcus suis strain KKAHC02]
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKDLDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
MNFEKIEQAYDLLLENVQTIQNQLGTNIYDAMIEQNAAYVANQHETDLVVNNNQTLKQLDLTKEEWRRAYQFLLIKANQT
EPMQYNHQFTPDSIGFILSFLVDQLVPTQKVTVLEIGSGTGNLAQTILNASQKDLDYLGIEVDDLLIDLSASIADVMQAD
ISFAQGDAVRPQILKESQVILGDLPIGYYPDDQIASRYQVASPNEHTYAHHLLMEQSLKYLEKDGFAILLAPNDLLTSPQ
SDLLKGWLQEQANIVAMIALPPNLFGKAAMAKSIFVLQKKAARSLTPFVYPLQSLQEPEAIQKFMLNFKNWKQENAI
Nucleotide
Download Length: 954 bp
>NTDB_id=1080050 ACKWPP_RS00785 WP_002936545.1 123005..123958(+) (comYH) [Streptococcus suis strain KKAHC02]
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTTAACGCCAGTCAGAAAG
ACTTGGACTATCTGGGGATTGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGTTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTTA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGTTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
ATGAATTTTGAAAAGATCGAACAGGCTTACGACCTGCTATTAGAAAACGTACAGACTATCCAAAACCAGCTAGGTACCAA
TATCTATGATGCCATGATTGAGCAAAATGCTGCTTACGTAGCTAATCAGCATGAGACGGACCTTGTTGTCAATAACAATC
AGACCTTGAAACAACTAGATTTAACCAAGGAAGAATGGCGTCGTGCCTACCAATTCCTGCTCATCAAGGCCAATCAGACT
GAACCCATGCAGTACAATCACCAGTTCACACCAGACTCTATCGGATTTATCCTATCTTTTCTAGTAGACCAATTGGTGCC
GACTCAAAAGGTGACGGTTCTGGAAATTGGTTCGGGGACAGGCAATCTAGCTCAGACCATTCTTAACGCCAGTCAGAAAG
ACTTGGACTATCTGGGGATTGAAGTGGACGACCTCTTGATTGATTTGTCGGCAAGTATTGCGGATGTCATGCAGGCAGAT
ATTTCTTTTGCTCAGGGAGATGCGGTACGTCCGCAGATTTTGAAGGAAAGTCAAGTAATTTTGGGAGATTTGCCTATTGG
CTACTATCCAGATGACCAGATTGCTAGCCGTTATCAGGTCGCCAGCCCAAATGAACATACCTACGCCCATCATTTACTTA
TGGAACAATCCCTCAAATATCTGGAAAAAGATGGTTTTGCGATTTTGTTGGCTCCAAATGATTTATTGACTAGTCCGCAA
AGCGATTTGCTGAAAGGTTGGTTACAGGAGCAAGCCAATATTGTTGCCATGATTGCCCTGCCACCAAATCTCTTTGGGAA
GGCTGCTATGGCCAAGTCTATTTTTGTCTTGCAAAAGAAAGCTGCAAGATCGTTGACGCCGTTTGTTTATCCCTTACAAA
GTCTTCAAGAACCAGAAGCTATTCAGAAGTTCATGCTCAATTTCAAAAATTGGAAGCAAGAGAATGCAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
60.443 |
99.685 |
0.603 |
| comYH | Streptococcus mutans UA159 |
60.127 |
99.685 |
0.599 |