Detailed information
Bioinformatically predicted
Overview
| Name | crp | Type | Regulator |
| Locus tag | ACKN8R_RS00300 | Genome accession | NZ_CP176031 |
| Coordinates | 60804..61436 (+) | Length | 210 a.a. |
| NCBI ID | WP_005381432.1 | Uniprot ID | U2ZZI4 |
| Organism | Vibrio parahaemolyticus strain L2171 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 55804..66436
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACKN8R_RS00275 (ACKN8R_00275) | - | 55824..57743 (+) | 1920 | WP_043043454.1 | ABC transporter ATP-binding protein | - |
| ACKN8R_RS00280 (ACKN8R_00280) | - | 57740..58228 (+) | 489 | WP_005458139.1 | TIGR02444 family protein | - |
| ACKN8R_RS00285 (ACKN8R_00285) | - | 58315..59322 (+) | 1008 | WP_193282485.1 | hydrolase | - |
| ACKN8R_RS00290 (ACKN8R_00290) | - | 59356..59568 (+) | 213 | WP_005458136.1 | YheU family protein | - |
| ACKN8R_RS00295 (ACKN8R_00295) | - | 59694..60563 (+) | 870 | WP_005458134.1 | phosphoribulokinase | - |
| ACKN8R_RS00300 (ACKN8R_00300) | crp | 60804..61436 (+) | 633 | WP_005381432.1 | cAMP-activated global transcriptional regulator CRP | Regulator |
| ACKN8R_RS00305 (ACKN8R_00305) | - | 61581..62372 (-) | 792 | WP_193282487.1 | DUF1338 domain-containing protein | - |
| ACKN8R_RS00310 (ACKN8R_00310) | astD | 62615..64072 (-) | 1458 | WP_005480036.1 | succinylglutamate-semialdehyde dehydrogenase | - |
| ACKN8R_RS00315 (ACKN8R_00315) | astA | 64101..65120 (-) | 1020 | WP_005458129.1 | arginine N-succinyltransferase | - |
Sequence
Protein
Download Length: 210 a.a. Molecular weight: 23665.48 Da Isoelectric Point: 7.8388
>NTDB_id=1079390 ACKN8R_RS00300 WP_005381432.1 60804..61436(+) (crp) [Vibrio parahaemolyticus strain L2171]
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEED
QERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSAQMARRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLISAHGKTIVVYGTR
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEED
QERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSAQMARRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLISAHGKTIVVYGTR
Nucleotide
Download Length: 633 bp
>NTDB_id=1079390 ACKN8R_RS00300 WP_005381432.1 60804..61436(+) (crp) [Vibrio parahaemolyticus strain L2171]
ATGGTTCTAGGTAAACCTCAAACCGACCCAACATTAGAGTGGTTTCTTTCACACTGTCATATTCATAAGTACCCATCAAA
GAGCACGCTAATTCACGCAGGTGAAAAAGCTGAAACGTTGTACTACATCGTTAAAGGCTCTGTTGCGGTTCTTATCAAGG
ACGAAGAAGGTAAGGAAATGATTCTTTCTTACCTAAACCAAGGTGACTTTATTGGTGAACTTGGTCTATTCGAAGAAGAC
CAAGAGCGTACAGCTTGGGTTCGCGCTAAATCTCCTTGTGAAGTTGCTGAAATTTCTTTCAAGAAGTTCCGTCAGCTTAT
CCAAGTAAACCCAGACATCCTAATGCGTCTTTCTGCGCAGATGGCTCGTCGTCTTCAAGTAACTAGCCAAAAAGTGGGTG
ACCTAGCGTTCCTAGACGTAACTGGTCGTATCGCTCAGACGCTTCTGAACCTTGCTAAACAACCAGATGCGATGACTCAC
CCAGACGGCATGCAAATCAAGATCACTCGTCAAGAAATCGGTCAAATCGTTGGCTGTTCTCGTGAGACAGTAGGTCGTAT
CTTGAAGATGCTAGAAGAGCAGAACCTAATCTCTGCGCACGGTAAAACTATCGTTGTTTACGGTACTCGTTAA
ATGGTTCTAGGTAAACCTCAAACCGACCCAACATTAGAGTGGTTTCTTTCACACTGTCATATTCATAAGTACCCATCAAA
GAGCACGCTAATTCACGCAGGTGAAAAAGCTGAAACGTTGTACTACATCGTTAAAGGCTCTGTTGCGGTTCTTATCAAGG
ACGAAGAAGGTAAGGAAATGATTCTTTCTTACCTAAACCAAGGTGACTTTATTGGTGAACTTGGTCTATTCGAAGAAGAC
CAAGAGCGTACAGCTTGGGTTCGCGCTAAATCTCCTTGTGAAGTTGCTGAAATTTCTTTCAAGAAGTTCCGTCAGCTTAT
CCAAGTAAACCCAGACATCCTAATGCGTCTTTCTGCGCAGATGGCTCGTCGTCTTCAAGTAACTAGCCAAAAAGTGGGTG
ACCTAGCGTTCCTAGACGTAACTGGTCGTATCGCTCAGACGCTTCTGAACCTTGCTAAACAACCAGATGCGATGACTCAC
CCAGACGGCATGCAAATCAAGATCACTCGTCAAGAAATCGGTCAAATCGTTGGCTGTTCTCGTGAGACAGTAGGTCGTAT
CTTGAAGATGCTAGAAGAGCAGAACCTAATCTCTGCGCACGGTAAAACTATCGTTGTTTACGGTACTCGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| crp | Vibrio cholerae strain A1552 |
98.095 |
100 |
0.981 |
| crp | Haemophilus influenzae Rd KW20 |
75.49 |
97.143 |
0.733 |
| crp | Acinetobacter baumannii D1279779 |
47.826 |
98.571 |
0.471 |