Detailed information NTG1078480

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: ACJ23B_RS13080
• Genome accession: NZ_CP175653
• Coordinates: 2570215..2570697 (-)
• Length: 160 a.a.
• NCBI ID: WP_001046417.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain NIH1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2565215..2575697

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJ23B_RS13045 (ACJ23B_13065)	-	2565323..2566357 (+)	1035	WP_001189451.1	lipase secretion chaperone	-
ACJ23B_RS13050 (ACJ23B_13070)	-	2566472..2567413 (+)	942	WP_085946156.1	triacylglycerol lipase	-
ACJ23B_RS13055 (ACJ23B_13075)	rplS	2567465..2567833 (-)	369	WP_000014562.1	50S ribosomal protein L19	-
ACJ23B_RS13060 (ACJ23B_13080)	trmD	2568041..2568781 (-)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ACJ23B_RS13065 (ACJ23B_13085)	rimM	2568827..2569375 (-)	549	WP_000189236.1	ribosome maturation factor RimM	-
ACJ23B_RS13070 (ACJ23B_13090)	rpsP	2569395..2569646 (-)	252	WP_000260334.1	30S ribosomal protein S16	-
ACJ23B_RS13075 (ACJ23B_13095)	pilE	2569793..2570218 (-)	426	WP_000788342.1	type IV pilin protein	Machinery gene
ACJ23B_RS13080 (ACJ23B_13100)	pilY2	2570215..2570697 (-)	483	WP_001046417.1	type IV pilin protein	Machinery gene
ACJ23B_RS13085 (ACJ23B_13105)	pilY1	2570710..2574564 (-)	3855	WP_000768966.1	PilC/PilY family type IV pilus protein	Machinery gene
ACJ23B_RS13090 (ACJ23B_13110)	pilX	2574576..2575394 (-)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=1078480 ACJ23B_RS13080 WP_001046417.1 2570215..2570697(-) (pilY2) [Acinetobacter baumannii strain NIH1]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=1078480 ACJ23B_RS13080 WP_001046417.1 2570215..2570697(-) (pilY2) [Acinetobacter baumannii strain NIH1]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGACAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	98.125	100	0.981
comE	Acinetobacter baylyi ADP1	41.279	100	0.444