Detailed information NTG1078402

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: ACJ23C_RS05540
• Genome accession: NZ_CP175646
• Coordinates: 1031752..1032234 (+)
• Length: 160 a.a.
• NCBI ID: WP_001046417.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain HUMC1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1026752..1037234

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJ23C_RS05530 (ACJ23C_05525)	pilX	1027055..1027873 (+)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
ACJ23C_RS05535 (ACJ23C_05530)	pilY1	1027885..1031739 (+)	3855	WP_000768966.1	PilC/PilY family type IV pilus protein	Machinery gene
ACJ23C_RS05540 (ACJ23C_05535)	pilY2	1031752..1032234 (+)	483	WP_001046417.1	type IV pilin protein	Machinery gene
ACJ23C_RS05545 (ACJ23C_05540)	pilE	1032231..1032656 (+)	426	WP_000788342.1	type IV pilin protein	Machinery gene
ACJ23C_RS05550 (ACJ23C_05545)	rpsP	1032803..1033054 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
ACJ23C_RS05555 (ACJ23C_05550)	rimM	1033074..1033622 (+)	549	WP_000189236.1	ribosome maturation factor RimM	-
ACJ23C_RS05560 (ACJ23C_05555)	trmD	1033668..1034408 (+)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
ACJ23C_RS05565 (ACJ23C_05560)	rplS	1034616..1034984 (+)	369	WP_000014562.1	50S ribosomal protein L19	-
ACJ23C_RS05570 (ACJ23C_05565)	-	1035036..1035977 (-)	942	WP_085946156.1	triacylglycerol lipase	-
ACJ23C_RS05575 (ACJ23C_05570)	-	1036092..1037126 (-)	1035	WP_001189451.1	lipase secretion chaperone	-

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=1078402 ACJ23C_RS05540 WP_001046417.1 1031752..1032234(+) (pilY2) [Acinetobacter baumannii strain HUMC1]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=1078402 ACJ23C_RS05540 WP_001046417.1 1031752..1032234(+) (pilY2) [Acinetobacter baumannii strain HUMC1]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGACAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	98.125	100	0.981
comE	Acinetobacter baylyi ADP1	41.279	100	0.444