Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ACJ23C_RS05545 | Genome accession | NZ_CP175646 |
| Coordinates | 1032231..1032656 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain HUMC1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1027231..1037656
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJ23C_RS05535 (ACJ23C_05530) | pilY1 | 1027885..1031739 (+) | 3855 | WP_000768966.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| ACJ23C_RS05540 (ACJ23C_05535) | pilY2 | 1031752..1032234 (+) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| ACJ23C_RS05545 (ACJ23C_05540) | pilE | 1032231..1032656 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| ACJ23C_RS05550 (ACJ23C_05545) | rpsP | 1032803..1033054 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ACJ23C_RS05555 (ACJ23C_05550) | rimM | 1033074..1033622 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ACJ23C_RS05560 (ACJ23C_05555) | trmD | 1033668..1034408 (+) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ACJ23C_RS05565 (ACJ23C_05560) | rplS | 1034616..1034984 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ACJ23C_RS05570 (ACJ23C_05565) | - | 1035036..1035977 (-) | 942 | WP_085946156.1 | triacylglycerol lipase | - |
| ACJ23C_RS05575 (ACJ23C_05570) | - | 1036092..1037126 (-) | 1035 | WP_001189451.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=1078403 ACJ23C_RS05545 WP_000788342.1 1032231..1032656(+) (pilE) [Acinetobacter baumannii strain HUMC1]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=1078403 ACJ23C_RS05545 WP_000788342.1 1032231..1032656(+) (pilE) [Acinetobacter baumannii strain HUMC1]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |