Detailed information
Bioinformatically predicted
Overview
| Name | crp | Type | Regulator |
| Locus tag | ACJD0W_RS13840 | Genome accession | NZ_CP174456 |
| Coordinates | 3029889..3030521 (+) | Length | 210 a.a. |
| NCBI ID | WP_005381432.1 | Uniprot ID | U2ZZI4 |
| Organism | Vibrio rotiferianus strain BD182406 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3024889..3035521
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJD0W_RS13820 | - | 3026679..3027158 (+) | 480 | WP_010443967.1 | TIGR02444 family protein | - |
| ACJD0W_RS13825 | - | 3027373..3028380 (+) | 1008 | WP_045389421.1 | hydrolase | - |
| ACJD0W_RS13830 | - | 3028443..3028652 (+) | 210 | WP_010443970.1 | YheU family protein | - |
| ACJD0W_RS13835 | - | 3028780..3029649 (+) | 870 | WP_010443971.1 | phosphoribulokinase | - |
| ACJD0W_RS13840 | crp | 3029889..3030521 (+) | 633 | WP_005381432.1 | cAMP-activated global transcriptional regulator CRP | Regulator |
| ACJD0W_RS13845 | - | 3030670..3031461 (-) | 792 | WP_407832527.1 | DUF1338 domain-containing protein | - |
| ACJD0W_RS13850 | astD | 3031726..3033183 (-) | 1458 | WP_407832528.1 | succinylglutamate-semialdehyde dehydrogenase | - |
| ACJD0W_RS13855 | astA | 3033212..3034231 (-) | 1020 | WP_010443978.1 | arginine N-succinyltransferase | - |
Sequence
Protein
Download Length: 210 a.a. Molecular weight: 23665.48 Da Isoelectric Point: 7.8388
>NTDB_id=1077141 ACJD0W_RS13840 WP_005381432.1 3029889..3030521(+) (crp) [Vibrio rotiferianus strain BD182406]
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEED
QERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSAQMARRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLISAHGKTIVVYGTR
MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHAGEKAETLYYIVKGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEED
QERTAWVRAKSPCEVAEISFKKFRQLIQVNPDILMRLSAQMARRLQVTSQKVGDLAFLDVTGRIAQTLLNLAKQPDAMTH
PDGMQIKITRQEIGQIVGCSRETVGRILKMLEEQNLISAHGKTIVVYGTR
Nucleotide
Download Length: 633 bp
>NTDB_id=1077141 ACJD0W_RS13840 WP_005381432.1 3029889..3030521(+) (crp) [Vibrio rotiferianus strain BD182406]
ATGGTTCTAGGTAAACCTCAAACCGACCCAACATTAGAGTGGTTTCTTTCACACTGTCATATTCATAAGTACCCATCAAA
GAGCACGCTAATTCACGCGGGCGAAAAAGCAGAGACTTTGTACTACATCGTTAAAGGTTCTGTTGCGGTTCTTATCAAAG
ACGAAGAAGGTAAGGAAATGATCCTTTCTTACCTAAACCAAGGCGACTTCATTGGTGAGCTTGGTCTATTCGAAGAAGAC
CAAGAGCGTACAGCTTGGGTTCGCGCTAAATCTCCTTGTGAAGTGGCAGAGATTTCTTTCAAGAAATTCCGTCAACTTAT
CCAAGTTAACCCAGACATCCTAATGCGCCTTTCTGCGCAAATGGCTCGTCGTCTACAAGTTACTAGCCAAAAAGTGGGTG
ACCTAGCGTTCCTAGACGTAACTGGTCGTATCGCTCAGACTCTTCTGAACCTTGCTAAACAGCCAGATGCGATGACGCAC
CCAGACGGCATGCAAATCAAGATCACTCGTCAAGAAATCGGTCAAATCGTTGGCTGTTCTCGTGAGACTGTAGGTCGTAT
CTTGAAGATGCTAGAAGAGCAGAACCTAATTTCTGCGCACGGTAAGACTATCGTTGTTTACGGGACTCGTTAA
ATGGTTCTAGGTAAACCTCAAACCGACCCAACATTAGAGTGGTTTCTTTCACACTGTCATATTCATAAGTACCCATCAAA
GAGCACGCTAATTCACGCGGGCGAAAAAGCAGAGACTTTGTACTACATCGTTAAAGGTTCTGTTGCGGTTCTTATCAAAG
ACGAAGAAGGTAAGGAAATGATCCTTTCTTACCTAAACCAAGGCGACTTCATTGGTGAGCTTGGTCTATTCGAAGAAGAC
CAAGAGCGTACAGCTTGGGTTCGCGCTAAATCTCCTTGTGAAGTGGCAGAGATTTCTTTCAAGAAATTCCGTCAACTTAT
CCAAGTTAACCCAGACATCCTAATGCGCCTTTCTGCGCAAATGGCTCGTCGTCTACAAGTTACTAGCCAAAAAGTGGGTG
ACCTAGCGTTCCTAGACGTAACTGGTCGTATCGCTCAGACTCTTCTGAACCTTGCTAAACAGCCAGATGCGATGACGCAC
CCAGACGGCATGCAAATCAAGATCACTCGTCAAGAAATCGGTCAAATCGTTGGCTGTTCTCGTGAGACTGTAGGTCGTAT
CTTGAAGATGCTAGAAGAGCAGAACCTAATTTCTGCGCACGGTAAGACTATCGTTGTTTACGGGACTCGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| crp | Vibrio cholerae strain A1552 |
98.095 |
100 |
0.981 |
| crp | Haemophilus influenzae Rd KW20 |
75.49 |
97.143 |
0.733 |
| crp | Acinetobacter baumannii D1279779 |
47.826 |
98.571 |
0.471 |