Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | ACJD0W_RS13615 | Genome accession | NZ_CP174456 |
| Coordinates | 2984797..2985312 (-) | Length | 171 a.a. |
| NCBI ID | WP_010443909.1 | Uniprot ID | A0A7Y3ZC68 |
| Organism | Vibrio rotiferianus strain BD182406 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2979797..2990312
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJD0W_RS13600 | aroB | 2981186..2982286 (-) | 1101 | WP_407832519.1 | 3-dehydroquinate synthase | - |
| ACJD0W_RS13605 | aroK | 2982318..2982836 (-) | 519 | WP_010443904.1 | shikimate kinase AroK | - |
| ACJD0W_RS13610 | pilQ | 2983026..2984759 (-) | 1734 | WP_354419523.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| ACJD0W_RS13615 | pilP | 2984797..2985312 (-) | 516 | WP_010443909.1 | pilus assembly protein PilP | Machinery gene |
| ACJD0W_RS13620 | pilO | 2985302..2985895 (-) | 594 | WP_038885610.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ACJD0W_RS13625 | pilN | 2985892..2986476 (-) | 585 | WP_010443929.1 | PilN domain-containing protein | Machinery gene |
| ACJD0W_RS13630 | pilM | 2986460..2987476 (-) | 1017 | WP_407832520.1 | type IV pilus assembly protein PilM | Machinery gene |
| ACJD0W_RS13635 | - | 2987616..2990183 (+) | 2568 | WP_407832521.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 171 a.a. Molecular weight: 18822.68 Da Isoelectric Point: 9.8501
>NTDB_id=1077137 ACJD0W_RS13615 WP_010443909.1 2984797..2985312(-) (pilP) [Vibrio rotiferianus strain BD182406]
MKANVLLLAVISAALLGCQANDDSLDDYIRQVETDARRDVAQLEPIEEFAVAAYQAKAQRAPFELPKEATIASQPVARKD
CWQPSNRKRSGKLEHFPLSQLRLKGVMGMGNSVSGLVQAPNGTVYKVHAGQYIGKNNGKVTHVTHSYLLINETLPDGLGC
WQKRKVKLALR
MKANVLLLAVISAALLGCQANDDSLDDYIRQVETDARRDVAQLEPIEEFAVAAYQAKAQRAPFELPKEATIASQPVARKD
CWQPSNRKRSGKLEHFPLSQLRLKGVMGMGNSVSGLVQAPNGTVYKVHAGQYIGKNNGKVTHVTHSYLLINETLPDGLGC
WQKRKVKLALR
Nucleotide
Download Length: 516 bp
>NTDB_id=1077137 ACJD0W_RS13615 WP_010443909.1 2984797..2985312(-) (pilP) [Vibrio rotiferianus strain BD182406]
ATGAAAGCTAATGTCTTGTTGTTGGCAGTGATCAGTGCTGCCCTCCTTGGATGTCAAGCCAACGACGACTCTCTTGATGA
TTATATTCGTCAAGTCGAAACTGATGCTAGGCGAGATGTCGCCCAACTTGAGCCTATTGAAGAGTTCGCGGTTGCTGCAT
ACCAAGCAAAAGCTCAACGAGCACCTTTTGAGCTACCTAAGGAAGCGACAATTGCATCTCAGCCAGTTGCTCGAAAAGAT
TGTTGGCAACCTTCAAACCGCAAACGAAGTGGCAAGCTGGAGCATTTTCCTCTAAGCCAGTTGAGACTAAAAGGTGTTAT
GGGGATGGGAAATAGTGTCTCTGGGTTAGTACAGGCTCCCAATGGAACCGTATACAAGGTTCATGCTGGTCAGTACATCG
GAAAAAATAATGGCAAAGTAACTCACGTTACGCATTCGTATTTACTAATTAACGAGACTTTACCCGATGGCTTAGGGTGT
TGGCAAAAACGCAAAGTAAAGCTCGCTCTGAGATAA
ATGAAAGCTAATGTCTTGTTGTTGGCAGTGATCAGTGCTGCCCTCCTTGGATGTCAAGCCAACGACGACTCTCTTGATGA
TTATATTCGTCAAGTCGAAACTGATGCTAGGCGAGATGTCGCCCAACTTGAGCCTATTGAAGAGTTCGCGGTTGCTGCAT
ACCAAGCAAAAGCTCAACGAGCACCTTTTGAGCTACCTAAGGAAGCGACAATTGCATCTCAGCCAGTTGCTCGAAAAGAT
TGTTGGCAACCTTCAAACCGCAAACGAAGTGGCAAGCTGGAGCATTTTCCTCTAAGCCAGTTGAGACTAAAAGGTGTTAT
GGGGATGGGAAATAGTGTCTCTGGGTTAGTACAGGCTCCCAATGGAACCGTATACAAGGTTCATGCTGGTCAGTACATCG
GAAAAAATAATGGCAAAGTAACTCACGTTACGCATTCGTATTTACTAATTAACGAGACTTTACCCGATGGCTTAGGGTGT
TGGCAAAAACGCAAAGTAAAGCTCGCTCTGAGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Vibrio campbellii strain DS40M4 |
74.269 |
100 |
0.743 |
| pilP | Vibrio cholerae strain A1552 |
58.14 |
100 |
0.585 |