Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACCH06_RS02155 Genome accession   NZ_CP174157
Coordinates   441722..442672 (+) Length   316 a.a.
NCBI ID   WP_258728611.1    Uniprot ID   -
Organism   Bacillus atrophaeus strain SHZ-24     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 436722..447672
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACCH06_RS02130 rapC 438016..439164 (+) 1149 WP_004430265.1 tetratricopeptide repeat protein Regulator
  ACCH06_RS02135 phrC 439148..439267 (+) 120 WP_004430266.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  ACCH06_RS02140 - 439401..439508 (-) 108 WP_072053240.1 YjcZ family sporulation protein -
  ACCH06_RS02145 - 439712..439795 (-) 84 WP_370499808.1 YjcZ family sporulation protein -
  ACCH06_RS02150 - 439926..441290 (-) 1365 WP_277714329.1 aspartate kinase -
  ACCH06_RS02155 ceuB 441722..442672 (+) 951 WP_258728611.1 ABC transporter permease Machinery gene
  ACCH06_RS02160 - 442665..443612 (+) 948 WP_010789704.1 iron chelate uptake ABC transporter family permease subunit -
  ACCH06_RS02165 - 443606..444364 (+) 759 WP_063638742.1 ABC transporter ATP-binding protein -
  ACCH06_RS02170 - 444386..445339 (+) 954 WP_004430274.1 siderophore ABC transporter substrate-binding protein -
  ACCH06_RS02175 - 445630..447048 (-) 1419 WP_258728613.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34953.47 Da        Isoelectric Point: 9.8731

>NTDB_id=1074647 ACCH06_RS02155 WP_258728611.1 441722..442672(+) (ceuB) [Bacillus atrophaeus strain SHZ-24]
MKLRYLVVLLILLAFCSIFIGVEDLSPLDLFHMNKEEASTLFASRLPRLISIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLIKMLIAFIFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNISSWLQGDFSLIVKGRYELLFLSIPLVIIAYVFADKFTVAGMGESFSVNLGLKYKRIVNIGLIISSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLLCDILGRIIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=1074647 ACCH06_RS02155 WP_258728611.1 441722..442672(+) (ceuB) [Bacillus atrophaeus strain SHZ-24]
ATGAAGCTACGTTACTTAGTTGTTTTACTTATTTTACTTGCATTCTGTTCTATTTTTATCGGCGTAGAGGATCTGTCGCC
GCTGGATCTTTTTCATATGAATAAAGAAGAGGCTTCAACGCTTTTCGCCAGCCGTTTACCGAGATTAATCAGCATTATTA
TTGCAGGCATGAGCCTGAGCATCTGCGGTTTAATTATGCAGCAGATCAGCCGGAATAAATTCGTTTCGCCGACAACTGCC
GGCACGATGGATTGGGCGAGGCTCGGGATTTTGATTTCATTAATGCTGTTTACCTCTGCCAGTCCGCTGATAAAAATGCT
GATTGCTTTTATATTTGCGCTTGCGGGCAACTTCCTGTTCATGAAAATCCTTGAGAGAATAAAGTTTAATGATACGATCT
TTATTCCTCTCGTGGGCTTAATGCTTGGGAACATTGTCAGCTCGATTGCGACGTTTATCGCGTATAAATATGATTTAATC
CAAAATATTTCTTCATGGCTTCAAGGAGACTTCTCTCTCATTGTGAAAGGGAGATATGAACTTTTATTCTTGAGTATCCC
GCTTGTGATAATCGCATATGTATTTGCTGACAAATTCACAGTAGCAGGGATGGGGGAAAGCTTCTCTGTCAACCTTGGCC
TGAAATATAAACGGATTGTGAATATCGGGCTGATTATATCGTCGCTGATCACGTCCCTCGTGATTTTGACTGTCGGTATG
CTGCCGTTCCTTGGGCTGATCATTCCGAATATCGTATCCATTTACAGGGGAGACAACCTGAAAAGCAGCCTGCCCCACAC
AGCTCTTTTAGGTGCCGTTTTTGTGCTGCTTTGCGATATATTGGGCAGGATTATCATTTTTCCGTACGAAATCTCGATTG
GCTTGATGGTCGGAGTCATCGGCAGCGGTATTTTCCTGTATATGCTGTTAAGGAGAAAAGCCTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.848

100

0.528

Multiple sequence alignment