Detailed information NTG1074645

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ACCH06_RS02130
• Genome accession: NZ_CP174157
• Coordinates: 438016..439164 (+)
• Length: 382 a.a.
• NCBI ID: WP_004430265.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain SHZ-24
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 433016..444164

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACCH06_RS02110	-	433340..434020 (-)	681	WP_258728607.1	ABC transporter ATP-binding protein	-
ACCH06_RS02115	-	434038..435516 (-)	1479	WP_406589614.1	ABC transporter permease	-
ACCH06_RS02120	-	435731..436417 (+)	687	WP_406589615.1	winged helix-turn-helix domain-containing protein	-
ACCH06_RS02125	-	436404..437822 (+)	1419	WP_258728609.1	HAMP domain-containing sensor histidine kinase	-
ACCH06_RS02130	rapC	438016..439164 (+)	1149	WP_004430265.1	tetratricopeptide repeat protein	Regulator
ACCH06_RS02135	phrC	439148..439267 (+)	120	WP_004430266.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
ACCH06_RS02140	-	439401..439508 (-)	108	WP_072053240.1	YjcZ family sporulation protein	-
ACCH06_RS02145	-	439712..439795 (-)	84	WP_370499808.1	YjcZ family sporulation protein	-
ACCH06_RS02150	-	439926..441290 (-)	1365	WP_277714329.1	aspartate kinase	-
ACCH06_RS02155	ceuB	441722..442672 (+)	951	WP_258728611.1	ABC transporter permease	Machinery gene
ACCH06_RS02160	-	442665..443612 (+)	948	WP_010789704.1	iron chelate uptake ABC transporter family permease subunit	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45756.03 Da
• Isoelectric Point: 4.8173

>NTDB_id=1074645 ACCH06_RS02130 WP_004430265.1 438016..439164(+) (rapC) [Bacillus atrophaeus strain SHZ-24]
MKSEVIPSSAVGQKINEWYKYIRTFSVPDAEILKAEIEREIEHMEDDPNLLLYFSLMEFRHQLMLDYLEPLEKLKIEDQP
SLSELLRNIDSNQADLKGLLDYYVNFFRGMHEFDKREFISAITYYKQAEKRLSFVADHIERAEFYFKVAEAYYYMKQTYF
SLIHIKNAYEIYAEQETYNVRIIQCHFVFGVNLMDERRFEQAARHFELALHMAESENKAQLVGRALYNIGLCYYNQDLLE
PAIDYFERAVSIFESNAIIKSLPQAYFLITQIYYKCKNNSKAVEYHSRGYEYAKETDDIDYMVKFEFLKTLYQAQPDEQG
IEKCFYYLKNKNMYADIEDLALVVAKYYYEQKNFEMSSSYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1074645 ACCH06_RS02130 WP_004430265.1 438016..439164(+) (rapC) [Bacillus atrophaeus strain SHZ-24]
ATGAAGAGCGAGGTGATTCCTTCTTCAGCAGTCGGTCAAAAAATTAACGAGTGGTATAAGTATATTCGTACGTTCAGTGT
ACCGGACGCCGAAATTCTAAAAGCCGAGATTGAACGGGAAATTGAACATATGGAAGACGATCCGAACTTGCTGCTATATT
TCTCATTAATGGAATTCCGCCACCAGCTGATGCTTGATTATCTTGAGCCGTTAGAAAAATTAAAAATAGAGGACCAGCCG
AGCTTGTCAGAATTACTGCGCAACATTGACAGCAATCAGGCTGATTTAAAAGGGCTGCTTGATTATTATGTAAACTTTTT
TCGGGGGATGCACGAATTTGATAAGAGAGAATTCATTTCAGCCATCACCTATTACAAACAGGCTGAAAAAAGACTTTCCT
TTGTAGCGGATCATATTGAAAGAGCCGAGTTCTATTTTAAAGTGGCCGAAGCTTATTACTATATGAAACAGACGTATTTC
TCACTGATCCATATCAAAAATGCCTACGAAATATACGCTGAGCAAGAAACATATAATGTGAGAATTATCCAGTGCCATTT
TGTTTTCGGAGTAAATTTGATGGATGAAAGGCGTTTCGAACAAGCCGCGCGCCATTTTGAACTCGCATTACATATGGCGG
AATCAGAAAATAAAGCACAATTGGTCGGAAGAGCGCTTTATAATATTGGGTTGTGTTATTACAACCAAGATCTTCTTGAG
CCTGCCATTGACTATTTTGAAAGAGCGGTTTCTATATTCGAAAGCAACGCCATCATTAAATCTCTTCCTCAGGCATATTT
TCTGATCACGCAGATTTATTATAAATGTAAAAATAATTCTAAAGCAGTGGAATATCACAGCAGGGGTTATGAATATGCTA
AAGAAACAGATGATATTGACTACATGGTGAAATTTGAATTTTTAAAAACTCTATATCAAGCCCAGCCGGATGAACAAGGA
ATCGAAAAATGCTTTTATTACCTAAAAAATAAAAATATGTATGCTGATATAGAGGATTTAGCACTAGTAGTAGCTAAATA
TTACTATGAACAAAAAAACTTCGAAATGTCATCTTCCTACTTTCTCAAAGTAGAAGAGGCCAGAAAACAAATACAAAGGA
GTGAAGGTTTATATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_1) (224-256)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	85.079	100	0.851
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571