Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   ACJED3_RS13825 Genome accession   NZ_CP174155
Coordinates   2602318..2602437 (-) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain G01     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 2597318..2607437
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJED3_RS13805 pbpG 2597688..2599763 (-) 2076 WP_014481227.1 transglycosylase domain-containing protein -
  ACJED3_RS13810 speE 2599965..2600795 (+) 831 WP_003227543.1 spermidine synthase -
  ACJED3_RS13815 speB 2600856..2601728 (+) 873 WP_003227545.1 agmatinase -
  ACJED3_RS13820 - 2601793..2602220 (-) 428 Protein_2672 YbaK/EbsC family protein -
  ACJED3_RS13825 phrF 2602318..2602437 (-) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  ACJED3_RS13830 rapF 2602421..2603566 (-) 1146 WP_014481226.1 response regulator aspartate phosphatase RapF Regulator
  ACJED3_RS13835 - 2603569..2603799 (+) 231 Protein_2675 hypothetical protein -
  ACJED3_RS13840 ywhK 2603796..2605151 (+) 1356 WP_014481224.1 YncE family protein -
  ACJED3_RS13845 ywhL 2605190..2606566 (+) 1377 WP_014481223.1 YncE family protein -
  ACJED3_RS13850 albG 2606572..2607273 (-) 702 WP_014481222.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=1074598 ACJED3_RS13825 WP_009968329.1 2602318..2602437(-) (phrF) [Bacillus subtilis strain G01]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=1074598 ACJED3_RS13825 WP_009968329.1 2602318..2602437(-) (phrF) [Bacillus subtilis strain G01]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment